Squalius cephalus (European chub): 307170079
Help
Entry
307170079 CDS
T11930
Symbol
usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49 isoform 1
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scep01002
]
307170079 (usp49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
scep04121
]
307170079 (usp49)
Enzymes [BR:
scep01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
307170079 (usp49)
Peptidases and inhibitors [BR:
scep01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
307170079 (usp49)
Ubiquitin system [BR:
scep04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
307170079 (usp49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
SFI1_first_CC
zf-UBP_var
MinC_N_1
Motif
Other DBs
NCBI-GeneID:
307170079
NCBI-ProteinID:
XP_079747204
LinkDB
All DBs
Position
13:complement(38681000..38694188)
Genome browser
AA seq
649 aa
AA seq
DB search
MDRCKHVARFRLGHGHSILNPQMWRCVDCGTTESVWACLKCTHVACGRYMEEHSLSHFQQ
TQHPLAMDVRELAVFCFACGDYVLNDNVEGDLKLLRGALSTVRIPGQRSLRSSTSDGGFR
ACDVSVSRTSARTALWHRRKTLLQSALRRWRNRQQEEERKREEKQEQEREEKRRQRREVK
KRLMGELANVPPRKSARLLTQAPRTTLALIPRKFRDPPERLPSAPKQSLLSLSGKTLSRK
TGRLRRYHASQSARRRKLAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDLCETE
ELLAKTNQSQGVGGGARTLATLVPPSLSSAELVQPKEPRSSSRQKMSLCHELHTLFRVMW
SGRWSLVSPFAMLHSVWNLIPAFRGYDQQDAQEFLCELLDKVQQELESDGPKKHFLIPIT
QRKLSKQVLKVLNTIFHGQLLSQVTCLSCKRKSNTVEPFWDLSLEFPERYHRMEKPSAAC
QRSCSLSEMLAKFTETEALEGCIYACNFCNRKRRKSSHKPLSLSEACKQLLICRLPQVLR
LHLKRFRWSGRNHREKIGVHVAFDQVLNIQPYCCSDAAPMPQREAFTYDLSAVVMHHGKG
FGSGHYTAYCYNTEGGFWVHCNDSEMNVCSVEEVCSTQAYILFYTQRSS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgtaagcatgtggcgcggttccgtttgggccacggccactcgatcctcaac
ccgcagatgtggcgctgcgtggactgcggcaccacggagtcggtgtgggcgtgtctgaag
tgcactcatgtggcgtgcggtcgctacatggaagaacactccctgagccacttccagcag
acgcagcacccgctagccatggacgtacgcgagctagccgtcttctgtttcgcgtgtggc
gactacgtgttgaacgataacgtcgagggcgacttgaagctcctccgcggggccctatca
accgtccgaatccctggtcagcgttccctgcgttcgtcaacatccgacggcgggtttaga
gcatgcgatgttagcgtgtcgcgtacgtccgcgcggacggcgttgtggcaccgacggaaa
accctcctacaaagtgcgttacgccgctggagaaaccggcagcaagaagaagagaggaag
cgtgaggaaaagcaagagcaagagcgcgaggagaagcgacgacaacgcagggaagtcaag
aaacggttaatgggagagctagcgaatgtcccaccgaggaaaagcgcgcggttgctaaca
caggctccccgtacgacgctcgccctcatccctcgaaagttccgcgatcctccggaacga
ctgccttcggctcccaaacagtcacttttgtcgctgtccggcaagactctttcgcgcaaa
acgggtcgtttacgccgatatcacgcatcgcagtcagcgcggcgcaggaaactagcaccg
ggagtcactggacttcgcaatcttgggaacacgtgctacatgaactccatccttcaggtt
ttgagccacttgcagaagtttcgggagtgtttcctcacgctggacttgtgcgagaccgag
gagctcctcgctaagactaaccaatcacagggtgtggggggcggagccaggaccctcgct
acgctagtcccgcccagtttgagttcggcggaactggtgcaaccgaaagagccacggtcc
tcgtctcggcagaagatgtcgttgtgtcacgagttgcacacgctcttccgggtcatgtgg
tcgggtcggtggtcgctagtgtctccgttcgctatgctacattccgtgtggaacctaatt
ccagcgtttcgcggatacgaccagcaggatgcgcaggagttcttgtgcgagcttctggat
aaagtccagcaggaactggagtcggacggacccaagaaacacttcttgatcccgatcacg
cagcggaaactgtccaaacaagtcctcaaagtgctcaacactatcttccacggacagctg
ctcagccaggtaacgtgtctgtcctgcaagcgcaagtcgaacacggtggagccgttctgg
gatctgtctctggagttcccggagcgataccaccgcatggagaagcctagcgccgcgtgt
caacggagctgctccctgtccgagatgctcgccaagttcacggagaccgaagctttggag
ggttgcatttacgcctgcaacttctgcaacagaaagcgccgcaaatcgtcccataagccc
ctgtctctttcagaggcctgtaagcagttactcatctgccgtttacctcaggttctgcgg
ctacacctcaaacgcttccggtggtccggtcggaaccacagggagaagattggtgtccac
gtggcttttgatcaggtcctgaatattcaaccatactgttgctcggacgccgctccgatg
ccgcagagagaagccttcacctatgacctttctgctgtagtgatgcatcatgggaaaggc
tttggctcagggcactacacggcctactgttataacactgaaggaggtttctgggttcac
tgtaacgactctgagatgaacgtgtgcagtgtggaggaggtgtgcagcactcaggcctac
atcttgttctacacacaacgctcctcttaa
DBGET
integrated database retrieval system
