Squalius cephalus (European chub): 307170175
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Entry
307170175 CDS
T11930
Symbol
LOC307170175
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
scep Squalius cephalus (European chub)
Pathway
scep04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
307170175 (LOC307170175)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307170175 (LOC307170175)
Ion channels [BR:
scep04040
]
Ligand-gated channels
Serotonin (5-HT3)
307170175 (LOC307170175)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
307170175
NCBI-ProteinID:
XP_079747343
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All DBs
Position
13:8621798..8640065
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AA seq
459 aa
AA seq
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MGHLLRFLLACFILLAVLQCVMNMLQCEDGHSGPTYESLQQVIDKKSFRPSVNLSTPTIT
NISFTLYAILGVNEKAQILTTFLWLRLYWFHEFLIWDPEPCDGITKISLPVKDLWTPDII
VYEFVDDDVSQACPYVYVNHTGHIRYDRMLRLVSACNLEIFSFPFDIQNCSFTFGSYMHT
IKDVRVSPALSFAEMTGNSQRYLQASGEWELVVILGDANILKFGIDEWDIITFWVVIKRR
PILYVVNLIIPSSFLMIIDILSFYLPPHSVDRSSFKMTLILGYTVFLLIMNDLLPSTANG
TPLIGIYFSVCLAFMVISLLETVLITCVLHHNSMRYREVPHWVQVLVMHFIARLICYSFP
EDPLAKLEEKQATNPTLSRQTATNVSGTMTLDVPELRQISKDLSEMNSYLTILRKEDHLQ
NQWCHVGYILDFLLFRIYLLIITGYALVIICMWCIWMKQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggacatcttttgcgttttcttttggcatgtttcattctacttgcagtgttgcagtgt
gtgatgaatatgcttcagtgtgaagacggacatagtggacccacgtatgaatctctacag
caagtcattgacaagaagtccttcagaccctcagtcaacctcagcacccccactatcacc
aacatctccttcactctctacgctatcttgggagttaatgaaaaagcacaaattcttacc
acattcctctggctcaggctgtactggttccatgagttcctcatttgggatccagaaccc
tgtgatggcattacgaagatctctcttccagtcaaagatctctggactcctgacattatc
gtttatgagtttgtggatgacgatgtatctcaggcctgtccttatgtgtatgtgaaccac
acgggccacatccgctatgacaggatgttgaggcttgttagcgcctgtaaccttgagatc
ttcagcttccctttcgacatacagaactgctctttcaccttcggctcctacatgcatacc
ataaaggatgtgcgtgtcagtcctgccctgtcctttgcggagatgaccggaaactcacag
cgatacctgcaggccagtggagaatgggagctggtggttatactgggtgacgcaaacatt
ttgaagtttggaatagacgaatgggacatcatcactttctgggtggtgattaagcgacga
ccgattctgtatgtggtgaacctgatcatccccagctccttcctcatgatcattgacatc
ctgtccttctacttgccgccgcacagcgtggatcgatcctccttcaaaatgaccctcatt
ctgggctatacggtgtttcttctcattatgaacgacctgcttcccagcactgctaatgga
acacctttaataggtatctatttctccgtgtgtttggcattcatggtcataagtctactg
gagacagtcctcattacctgcgttctccaccataattcaatgaggtacagggaggtgccg
cactgggtacaggtgctggtgatgcacttcattgctcggcttatttgctacagtttccct
gaagaccctttagccaaactagaagagaaacaagccaccaacccaacgctcagtcgacag
acagccactaatgtgtctggaaccatgacactggatgttcctgaactcagacagatcagt
aaggatcttagtgagatgaactcttatttgactattctacgaaaggaagaccatctacag
aaccagtggtgccacgtgggatacatcctggacttccttctctttcgcatttacctgctg
ataatcacaggttatgcacttgtaatcatatgcatgtggtgcatttggatgaagcaatag
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