Squalius cephalus (European chub): 307170678
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Entry
307170678 CDS
T11930
Symbol
nlgn3a
Name
(RefSeq) neuroligin-3a isoform 1
KO
K07378
neuroligin
Organism
scep Squalius cephalus (European chub)
Pathway
scep04514
Cell adhesion molecule (CAM) interaction
scep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
307170678 (nlgn3a)
04517 IgSF CAM signaling
307170678 (nlgn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307170678 (nlgn3a)
Membrane trafficking [BR:
scep04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
307170678 (nlgn3a)
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Paralog
GFIT
Motif
Pfam:
COesterase
BD-FAE
Abhydrolase_3
Motif
Other DBs
NCBI-GeneID:
307170678
NCBI-ProteinID:
XP_079748019
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All DBs
Position
14:complement(5546486..5748963)
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AA seq
855 aa
AA seq
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MWLAVRKNRLLLHQQDFCGGRARNVSLWIWIFCWCMTLVWGQGYHPTVNTQYGKLRGARV
PLPSEILGPVDQYLGVPYAAPPVGEKRFLPPEPPSSWSGIKNATHFAPVCPQNIHNAVPE
IMMPIWFTFNLDIVATYIQDQNEDCLYLNIYVPTEDVKRISKECARKPNKKICRKGGTHS
KKQGEDLSDNDGDEDEDIRDTGAKPVMVYIHGGSYMEGTGNMIDGSVLASYGNVIVITLN
FRVGVLGFLSTGDQAAKGNYGILDQIQALRWISENIGYFGGDSNRITVFGSGIGASCVSL
LTLSHHSEGLFHRAIIQSGSALSSWAVNYQPVKYTRLLAEKVGCNVLDTLDMVDCLRKKT
ARELVEQDIQPARYHVAFGPVIDGDVIPDDPEILMEQGEFLNYDIMLGVNQGEGLRFVEN
VVDSEDGVSGNDFDFSVSDFVDSLYGYPEGKDTLRETIKFMYTDWADRDNPETRRKTLVA
LFTDHQWVEPSVVTADLHARYGSPTYFYAFYHHCQSLMKPAWSDAAHGDEVPYVFGIPMI
GPTDLFPCNFSKNDVMLSAVVMTYWTNFAKTGDPNKPVPQDTKFIHTKANRFEEVAWSKY
NPQDQLYLHIGLKPRVRDHYRATKVAFWKHLVPHLYNLHDMFHYTSTTTKVPPPETTQNS
LSTKRPNGKAWPFNTKRPPMSPAYNSESGKEQWNGEEEPGPLVVENPRDYSTELSVTIAV
GASLLFLNVLAFAALYYRKDKRRQEQHPQPSSPRATTANDVNRHGPEEEIMSLQVNQTHH
ECDAGPPGDPLRLASLPDYTLTLRRSPDDIPLMTPNTITMIPNSLVGMPNLHPYNTFTAG
FNSTGLPHSHSTTRV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtggttagccgtgcgcaaaaaccggctccttttgcaccagcaggacttctgcggtggc
agggctcgcaacgtttctctgtggatatggattttttgttggtgtatgacgctcgtctgg
ggacaaggctaccaccccactgtgaatacgcagtacgggaaattacggggcgcgcgggtt
ccgttgcctagcgagatcctgggaccggtggaccagtacctgggagtgccgtacgccgcc
ccgccggtgggggagaaacgcttcctaccccctgagccgccctcgtcttggtcggggatc
aagaacgccactcatttcgcgccggtgtgcccgcaaaacattcacaacgccgttccggag
atcatgatgccaatctggttcacctttaacttggatatagttgccacttacatacaagat
caaaacgaggattgtttgtatctaaacatctatgttccaacggaggatgtcaaaagaata
tccaaggaatgtgccagaaaacccaacaagaaaatatgtagaaaaggaggaacccattcc
aaaaaacagggcgaggatttatccgataacgacggtgatgaagatgaagacatacgagat
actggagccaaacctgtgatggtgtacattcacggcggatcgtacatggagggcaccggg
aacatgattgacggaagcgtgctggccagttacgggaacgtcatcgttattacgctcaac
tttcgagtcggcgtcctagggttcctcagcacaggagaccaggctgctaaagggaattat
gggattctggatcagatccaggctctgcgttggataagcgagaacattggctatttcggc
ggcgattccaatcgcatcactgtttttggatcaggaattggtgcctcttgcgtgagcctt
ctgaccctgtcccatcattctgaaggactgtttcatcgtgccataatccagagcggctca
gcgttgtccagctgggccgtcaactaccagccggttaagtacacaaggctgctggcagag
aaagtgggctgtaatgtgttggacactttggacatggtagattgcttgagaaagaagaca
gctcgcgaactggtggaacaagacatccagccggcgagataccacgtagccttcggcccg
gtcatcgacggtgatgtcattcccgatgaccctgagatcctgatggagcagggcgagttt
ctcaactatgacatcatgctgggtgtcaaccagggtgagggtctgcgctttgtggagaac
gttgtggactctgaagacggtgtctcgggcaatgatttcgacttttctgtctcagacttt
gtggacagtctgtatggttacccagagggaaaggatactctacgagaaaccattaagttc
atgtacacagactgggcggacagagacaaccctgagacgcggcgcaagactctggtggcg
ctgtttactgaccatcagtgggtggagccctcagtggtgacggcagatcttcacgcccgg
tacgggtcacccacctacttctacgccttctaccaccactgtcagagcctgatgaagcct
gcctggtccgacgcggcccacggagacgaggtgccctacgtcttcggtatacccatgatt
ggcccgaccgacctcttcccctgcaacttctccaaaaatgatgttatgctcagtgcagtc
gtcatgacctactggacaaactttgccaaaactggagatcccaacaaaccagtgcctcag
gataccaagtttatccatactaaggccaatcgttttgaagaggtggcttggtccaaatac
aatccccaagaccagctgtacctgcacattggcctaaagccacgagtccgtgatcactac
cgtgccaccaaagtggcgttctggaagcacctggtccctcatctgtacaacctccatgac
atgttccactacacctccaccaccaccaaagtgccaccacccgagacgactcagaattcc
ctgtccaccaaacgtcccaatggcaaagcctggccgttcaacaccaagcggccaccaatg
tctccagcgtacaacagcgagagtgggaaggaacaatggaacggggaagaggaaccaggc
cctctggtggtggagaacccacgggattattccaccgagctgagcgtaaccatcgcagta
ggagcttcactgctgttcctcaatgttctggcgtttgctgctctgtactaccgcaaggat
aagcggcggcaggaacagcacccgcaacccagctcaccacgagccaccaccgccaatgac
gtgaaccgccacggccctgaagaggagatcatgtctttgcaggtgaaccagacgcaccac
gagtgcgacgcagggcctcccggtgacccgctgcggctcgcttcacttcccgactacacg
ctgactctgcggcgctcgcctgacgatatcccgctcatgacgccaaataccataaccatg
atccccaactcgctagtgggcatgccgaacctacatccgtacaacaccttcacagccggc
ttcaactccaccggcctgccacattcccactccaccacgcgtgtatag
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