KEGG   Squalius cephalus (European chub): 307170751
Entry
307170751         CDS       T11930                                 
Symbol
rack1
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
scep  Squalius cephalus (European chub)
Pathway
scep03010  Ribosome
Brite
KEGG Orthology (KO) [BR:scep00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    307170751 (rack1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scep03019]
    307170751 (rack1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:scep04147]
    307170751 (rack1)
Messenger RNA biogenesis [BR:scep03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     307170751 (rack1)
Exosome [BR:scep04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   307170751 (rack1)
  Exosomal proteins of colorectal cancer cells
   307170751 (rack1)
  Exosomal proteins of bladder cancer cells
   307170751 (rack1)
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_Gbeta WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_SPT8 Beta-prop_WDR36-Utp21_1st NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_EML TRM82_WD DSE1_N Beta-prop_RIG_2nd Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_SCAP ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_DCAF12 CFAP251_N Beta-prop_WDR41 ASA1 Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_IFT140_1st eIF2A Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_WDR75_2nd PROPPIN Beta-prop_ACSF4 Tricorn_2nd Beta-prop_pof12 Beta-prop_NUP159_NUP214 Cytochrom_D1
Other DBs
NCBI-GeneID: 307170751
NCBI-ProteinID: XP_079748123
LinkDB
Position
14:30984554..30989671
AA seq 317 aa
MTEQMTVRGTLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALK
GHSHFVSDVVISSDGQFALSGSWDSTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLA
NCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq 954 nt   +upstreamnt  +downstreamnt
atgaccgagcagatgacggtaaggggtacccttaagggtcacagtggatgggtcacccaa
atcgccacaacaccccaatttcccgacatgattctgtccgcgtcccgggacaagaccatc
atcatgtggaagctgacccgtgatgagaccaactatggcatcccccagcgtgctctgaag
ggccattcccacttcgtgagtgatgttgtcatctcatctgatggtcagttcgccctgtct
ggctcctgggacagcaccctgcgcctgtgggatctgacaactggcactacaacccgccgt
tttgttggacacaccaaggatgttctgagcgtggccttctctgctgacaaccgtcagatc
gtgtctggatccagagacaagaccatcaagctgtggaacaccctgggagtctgcaaatac
accatccaggatgacagccacactgagtgggtttcatgcgtgcgtttctctcccaatagc
agcaaccccattattgtgtcctgcgggtgggacaaaatggtcaaggtttggaatctggct
aactgcaagctgaagaccaaccacattggccacactggatacctgaacacagtgaccgtt
tctcctgatggatctctgtgtgcctccggtggaaaggatgggcaggccatgctatgggac
ctgaatgaaggcaagcacctttacaccctggatggtggggacaccatcaacgccctttgc
ttcagccccaaccgctactggctgtgtgctgccactggacccagcatcaagatctgggat
ctggagggcaagatcattgttgatgagctgaggcaggacatcatcaccaccaacagcaag
gctgagccacctcagtgcacttctctggcctggtctgctgatggacagactctctttgct
ggctacactgacaacctgatcagagtgtggcaggtgaccattggaaccagatag

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