Squalius cephalus (European chub): 307171515
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Entry
307171515 CDS
T11930
Symbol
tgfb5
Name
(RefSeq) transforming growth factor beta-2 proprotein
KO
K13376
transforming growth factor beta-2
Organism
scep Squalius cephalus (European chub)
Pathway
scep04010
MAPK signaling pathway
scep04060
Cytokine-cytokine receptor interaction
scep04068
FoxO signaling pathway
scep04110
Cell cycle
scep04218
Cellular senescence
scep04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
307171515 (tgfb5)
04350 TGF-beta signaling pathway
307171515 (tgfb5)
04068 FoxO signaling pathway
307171515 (tgfb5)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
307171515 (tgfb5)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
307171515 (tgfb5)
04218 Cellular senescence
307171515 (tgfb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
scep04052
]
307171515 (tgfb5)
00536 Glycosaminoglycan binding proteins [BR:
scep00536
]
307171515 (tgfb5)
Cytokines and neuropeptides [BR:
scep04052
]
Cytokines
Transforming growth factors (RSTK binding)
307171515 (tgfb5)
Glycosaminoglycan binding proteins [BR:
scep00536
]
Heparan sulfate / Heparin
Growth factors/receptors
307171515 (tgfb5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
CBM96
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
307171515
NCBI-ProteinID:
XP_079749320
LinkDB
All DBs
Position
14:complement(31764308..31771100)
Genome browser
AA seq
413 aa
AA seq
DB search
MWFINLTLLVLKLSVSAEGFSTCHSYNLDDHKSKRIEAVRGQILSKLRIRSPPHPEASAQ
PSVPVEVMLLYNSTKELLKERARQAESACERESSEEDYYAKEVQRVNMMPLRTDTNSINP
VPQSPYFRIVGFDVTNVERNSSTLVKAEFRIFRAPNPQARTTEQRVEIYQILKSEDVTAP
SQRYIDSRTVEPRAKGAWLSVDVTETVKEWMAFRERNLGLKISVHCPCCTFVPSTNNIVP
NKSEELEARFAGIDDDLIKQNRRPGVTKGQIEFSTKTPHLILTLLPTDRLDNPTKKNRKK
RSAADTSICSGADQGCCLRSLYIDFRRDLNWKWIHEPKGYKANFCAGNCPYLWSADNHYN
MILPLYNKMNPEASASPCCVPQDLEPLTIVYFLGRTPRVEQLSNMVVRSCKCR
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtggttcatcaatctaactttgctcgttctcaaactgtccgtgtccgcggaaggattc
tccacgtgccattcctacaacttggacgaccacaaatccaaaaggatcgaggcggtgcgc
ggacagattctgagcaagctacgcatccgcagtccaccgcaccccgaagccagcgcgcaa
ccatcggtcccggtggaggtgatgttactttacaacagcacgaaggagctgctgaaggag
cgcgcgcgccaggccgaaagcgcgtgcgagcgggagagcagcgaggaggactattacgct
aaagaggtgcagcgggtcaatatgatgccactgcgcacagatacgaactcaatcaatccg
gttcctcagagcccgtacttcaggatagtgggcttcgacgtcaccaacgtggagcgaaat
tccagtactttggtcaaagcagaatttcgcatcttcagagctccaaacccacaggctcgc
accactgagcagcgtgtggaaatataccagattctcaaatctgaggatgtgacggccccg
tcccagagatacatcgactccagaacggtagagcctcgtgccaagggggcgtggctttca
gtcgatgtcacggagactgtgaaggagtggatggcgttcagggagagaaatcttgggctc
aagatcagcgttcactgtccctgctgtacattcgtcccctccacaaacaatattgtcccg
aacaagagtgaagagttggaagccagatttgcaggcattgatgacgaccttataaagcag
aacagaagaccaggtgtgactaaaggacagattgaatttagcacaaaaaccccacatttg
atactaaccctgctgcccaccgaccgcctggacaaccctaccaagaagaaccgcaagaag
agatcagcagcagacacgtccatatgctcaggggctgatcagggctgctgtctgaggtct
ctgtatattgatttccgccgggacttgaactggaagtggatccacgaacccaaaggctac
aaagcaaatttctgtgcggggaactgtccttacttatggagcgcagacaaccactacaac
atgattctcccgctgtataataaaatgaatccagaagcatcagcatctccgtgttgtgtt
ccccaggacctggagcccctcaccatcgtttatttcctaggccgaacgccccgtgtggaa
cagctctccaacatggtggtccggtcctgcaagtgccgttga
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