Squalius cephalus (European chub): 307171539 Help Entry 307171539         CDS       T11930                                  Symbol thoc3 Name (RefSeq) THO complex subunit 3   KO K12880   THO complex subunit 3 Organism scep  Squalius cephalus (European chub) Pathway scep03013   Nucleocytoplasmic transport scep03040   Spliceosome Brite KEGG Orthology (KO) [BR:scep00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     307171539 (thoc3)   09122 Translation    03013 Nucleocytoplasmic transport     307171539 (thoc3)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:scep03019]     307171539 (thoc3)    03041 Spliceosome [BR:scep03041]     307171539 (thoc3) Messenger RNA biogenesis [BR:scep03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      307171539 (thoc3) Spliceosome [BR:scep03041]  Complex C   Other components    EJC/TREX     307171539 (thoc3)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     307171539 (thoc3) SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_EML eIF2A Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st DSE1_N Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_TEP1_C RMC1_N NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Tricorn_2nd TRM82_WD Beta-prop_ACSF4 PD40 PAC11 B-prop_COPA_B_2nd Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_WDR41 ASA1 Beta-prop_NWD2_C Beta-prop_Nup120_160 PROPPIN WD_LRWD1 Beta-prop_ELP1_1st Beta-prop_WDR11_1st Cytochrom_D1 Beta-prop_DCAF4 Motif Other DBs NCBI-GeneID:  307171539 NCBI-ProteinID:  XP_079749354 LinkDB All DBs Position 14:16136731..16140555 Genome browser AA seq 322 aa AA seqDB search MASSYYQEMQEVFRNNNKSREFPAHSAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDRL VKENNYRGHGDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCMATVSTKGENINICW SPDGQTIAVGNKDDVVTFIDAKTHRPRGEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL SYPELKLIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVEELVCVRCFSRLDWPV RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEIQCESPTFTVAWHPKRPLLAYACDDK EGKYDSNREAGTVKLFGLPNDS NT seq 969 nt NT seq  +upstreamnt  +downstreamnt atggcgtcctcatactatcaggagatgcaggaggttttcaggaataacaataaaagcaga gagttcccggctcacagtgctaaagtgcattcggttgcctggagctgtgatgggaaacgt ctggcgtccggatcatttgacaaaaccgccagcgtgtttgtcctggaaaaagatcgactg gtgaaggaaaacaattacagaggacatggagacagtgtggatcagctgtgctggcatccc acaaaccctgatctgttcgtcactgcatccggagacaagaccatccgcatctgggacgta cggaccaccaaatgcatggccacggtcagcacgaaaggggagaatatcaacatatgttgg agtcctgatggtcagacaattgctgtaggcaacaaggatgatgttgtaactttcattgat gccaagacacaccgtcctcgtggtgaggaacagttcaagtttgaggtcaatgagatctcc tggaataatgacaacgacatgttcttcctgaccaatggcaatggctgtatcaatatatta agttaccctgaactgaagctcatacagtcaattaatgcccatccgtccaactgcatctgc attaaatttgatcccactggcaagtattttgccaccggaagtgcagatgccctggtcagc ctgtgggatgtggaggagctggtgtgtgttcgctgcttctccagactagactggcctgtg cggacgctcagtttcagtcatgatggtaaaatgctggcgtcagcctctgaggaccatttc attgacatcgctgaagtagagacaggtgagaaactctgggagattcagtgcgagtctcca accttcactgtagcgtggcatccgaaaagacccctgctggcgtacgcctgcgacgataaa gagggcaaatatgacagcaaccgagaggcagggaccgtcaagctctttggacttcccaat gactcttaa

DBGET integrated database retrieval system