Squalius cephalus (European chub): 307172159
Help
Entry
307172159 CDS
T11930
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scep03400
]
307172159 (ascc3)
Enzymes [BR:
scep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
307172159 (ascc3)
DNA repair and recombination proteins [BR:
scep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
307172159 (ascc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
ASCC3_N
WHD_SNRNP200
ResIII
Helicase_C
AAA_22
Helicase_PWI
TPR_IFT122
Motif
Other DBs
NCBI-GeneID:
307172159
NCBI-ProteinID:
XP_079750375
LinkDB
All DBs
Position
15:complement(33380710..33636734)
Genome browser
AA seq
2198 aa
AA seq
DB search
MAPPRLTGALRSFSTVSKQDDSTQDLYDLKTKRLKRQEIFARDGLTWQKIVQFFTQHLEK
KDQPAATRELKNILQAAKQIVGTDFGQDTIESAGVFLFKTFHNKDQIGHEETRAIKQMFG
PFPASPAELCCAAVGRLVAQIGESQVDAFIQTQSSLKTVNHGSVFGRNIAFSFDTYALDA
HDSMPWSEGTDMDQAVDFHSFLNHHVGERRTGAERDDAYSAEELEQRNADSSILRQEVEK
YLNDGNMVSSSVEELSTSLFEMLASTRSDDELQNELFEFLGPQGFEMISMLLQRRSDIVD
SLLSFPSDCRSYIMSGKHKVARDESSKPTYGCQVTIQSEQEKQMMKIYRKEEKKERKREK
RGDEGESCESAFHFDPVELRLQREQALLTARRSPVLGRHRDYERIRYPHVYDSYAEAIKT
SAFVGGSKMLLPEGIRRENNKMYEEVQIPPNDPMPIGFEEKPVFISELDEIGQLVFKGMK
KLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIRKDQFKIV
YVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRK
SVGDVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNY
LDVASFLHVNPFIGLFYFDSRFRPVPLGQSFVGIKTTNKIQQLHDMEEVCYEKVLEQIRA
GHQVMVFVHARNSTVRTAMSLIEMAKNRGEVSFFQVDHGPDYGQCEKQVQRSRNKQMREM
FPDGFGIHHAGMLRQDRTLMENMFSRGYIKILVCTATLAWGVNLPAHAVIIKGTNIYDAK
RGALVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHEKLSHYLTLLTQQNPIESQFQQSL
SDNLNAEIALGTVTNVDEAVRWLSYTYLYVRMRANPLVYGINHKACQMDPQLELYRKELV
VESGRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTMETFNELFSAQKTEADILSI
VSKAEEFEQIKVRDEELEELEKMLCDFCELPAAGGVENGYGKINILLQTYIGRGEVDSFS
LISDLSYVAQNAARIVRALFEIALRKRWPVMTHRLLTLCKVIDKRLWGWAHPLRQFSSLP
SALLSRLEDKKLTLDQLRDMGKDEIGHMLHHVNIGLKVKQCVHQIPAILMESSIQPITRT
VLRVRLSITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLQKKQVLSGEPQQLV
FTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALG
NREYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNMYPTSK
VVYIAPLKALVRERIEDWKIRIEEKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGV
SRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKSVRVVGLSTALA
NARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRTHSP
AKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMTDIISTARDSNLKLTLAF
GIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYDGKTHR
YVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDH
LNAEIAAGTVASKQDAMDYITWTYFFRRLVMNPSYYNLDDTSHETINKYLSTLVERSLRD
LECSYCMEIQQDGQTIDPLTYGRIASYYYLKHQTIRMFKERLKPELPVQDLLAVLSEAEE
YAELPVRHNEDQLNSELAQRLPIPVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYSTDTK
TALDNTIRICQAMLDVVANEGWLVSALSICNLVQMIIQARWLHDSSLLTIPHIEKQDLYV
FRRWSGGYRGPIESLPELIAACDGKQDNFTSMVKEILQPNQISQAWLYVSQLPVVEVSLS
VKGWWEECVEQTERSIPSSVSNIRDESSWLSLHADQEYVLQVSLRRLNTGQQRRRQDSRA
QAPRFPKPKDEGWFLVLGEVEKKDLLAIKRVGFIRNRSSVSVAFYTPEKTGKCIYTLYLM
SDSYLGLDQQYDLRLNVQPASISAQVNTEISESRTGPK
NT seq
6597 nt
NT seq
+upstream
nt +downstream
nt
atggctccccctcggctcactggagccctgcgctccttctccaccgtcagcaagcaggac
gattcaacacaagacctttatgatctgaagaccaagcgcctgaaacggcaggaaatattt
gcccgagacggtctaacatggcagaagattgttcagttcttcacacaacatctggagaag
aaagatcagccagcggccactcgcgagctgaagaacatcctccaagctgccaaacaaatc
gttggtacggattttgggcaggacaccattgaaagtgctggagtcttcttgtttaaaaca
ttccacaacaaagaccagatcggtcatgaggaaaccagggccataaaacagatgtttgga
ccttttccggcgtctcctgccgagttgtgttgtgcagcggtgggtcgtttagtggcccag
attggagaatctcaggtggatgctttcatccaaacacagagttctctcaagacggtgaac
catgggtctgtctttgggcgaaacattgctttctcatttgacacgtatgcgctggatgct
cacgactctatgccctggtcagaggggactgatatggatcaggccgtggactttcacagc
ttcctaaatcatcatgttggtgagcggaggactggagctgagagagatgatgcttattca
gcggaagaactggagcagagaaacgcagacagctccatcctgagacaagaggtggagaag
tacctgaacgatggaaatatggtctcgtccagtgttgaagagctctccacctcgcttttt
gagatgcttgcctccacaaggagtgacgacgaactacaaaacgagctgtttgagtttcta
ggtcctcaggggtttgagatgatctccatgctcctccagagaaggtcagacatcgtggac
tctcttttgtccttcccgtcggattgccgatcttacatcatgtcaggaaagcataaagtg
gcgagagatgaatccagcaagcccacatacggctgccaggtgaccatccagtccgagcag
gagaagcagatgatgaagatctacaggaaagaggagaagaaggagaggaaacgagagaaa
cgaggggatgaaggggaatcctgtgaaagcgctttccattttgaccccgtggagctgaga
ttgcagagggagcaggccttgctgacggcacgccgttccccggtgttagggcggcaccga
gactacgagcgcatccgttaccctcacgtttatgattcttacgctgaagccatcaagacc
tctgcattcgtcggaggatccaagatgctgctgcccgaaggcatcagaagagagaataat
aagatgtatgaggaggttcagatcccccccaacgaccccatgcccatcggctttgaggag
aagcccgtgttcatctcggagctggacgagattggccagttggtgttcaagggcatgaag
aagttgaacagaatccagtctatagtgttcgagacagcttacaacaccaatgaaaacctg
ctcatctgcgcgcccaccggtgccggcaaaaccaacattgccatgctcaccgtcctgcac
gagatccgccagcacctgcagcccgggggagtcatacgcaaggaccagtttaagattgta
tacgttgctcctatgaaggccctggctgctgagatgactaattacttcagtaagcgattg
gagcctctgggaatcgctgtcaaggagctgacgggagacatgcagctgaccaaaggagaa
atcctccgcactcagatgttggtgacgactccggagaagtgggatgtggtgaccaggaag
agtgtgggagacgtggctctgtctcagatcgtccgactgctcatcctggatgaagttcat
cttcttcacgaggacagagggcccgttctcgagagcctggtggcccggacactgcggcag
gtggagtcgacccagagcatgattcgcatacttggtctctctgcaactctgccaaattac
ttggatgtggcgtctttcctgcatgtgaaccctttcattggattgttctactttgacagt
cgtttccgtcctgttcctcttggccagagctttgttggcatcaagactacaaataagatt
cagcagctgcatgacatggaggaggtgtgttatgaaaaagtcctggagcagatcagagca
ggtcaccaggtgatggtgtttgtgcacgcccgtaactctacggtccgcaccgccatgagt
ctgatcgagatggccaagaaccgaggagaggtgtcgttcttccaggtcgaccacggccca
gactacggccagtgtgagaaacaggtgcaacgctccagaaacaagcagatgagggagatg
tttcccgacggattcgggatccatcacgccgggatgttacggcaggaccgaacactcatg
gagaacatgttttccagaggatacataaagattctggtgtgcaccgccacgctggcctgg
ggtgttaacttacccgctcacgcagtcatcatcaagggcactaatatctatgatgccaag
cgtggagcgctggtggatctgggcatcctggacgtgatgcagatcttcggtcgggcggga
cggccacagtttgacaagtacggagagggaaccatcatcacgacacatgagaagctgagc
cattacctgacgctactgacccagcagaaccccattgagagccagttccagcagagccta
tctgacaacctcaacgctgagatcgctctagggacggtcactaatgttgatgaagccgtc
cgctggttgagttacacgtatctgtacgtgcgaatgagagccaatccactggtttacggg
atcaaccacaaggcctgtcagatggacccgcagttggagctctacaggaaggagttagtg
gtggagtcgggcagaaagctggataaagctcggatgatccgcttcgacgagaggacggga
tatttcgcctccacagatcttggcaggacagccagtcatttctacataaagtacaacact
atggagactttcaatgagcttttcagcgcgcagaagaccgaagcagacattctgagcatc
gtttcaaaagctgaagagtttgagcagatcaaggtccgggacgaggagctggaggagctg
gagaagatgttgtgtgatttctgtgagcttccagcggctggaggagtggagaacggttac
gggaagataaatatcctcctccagacgtacatcgggcgcggggaagtggacagcttctcc
ctcatctctgacctgtcttatgtagcgcagaacgcagctcgtatcgtgcgggccctgttc
gagatcgctctgaggaagcgctggcccgtcatgacccaccgcctgctgacgctgtgtaag
gtgatcgacaagcgcctgtggggctgggctcacccgctccgccagttcagctctctgccc
tcggccctgctgtcccgcctggaggacaagaagctcacgctggaccagctcagagacatg
ggcaaagacgagatcggtcacatgttgcatcacgtgaacatcgggctgaaggtgaagcag
tgtgttcatcagatccctgccatcctgatggagtccagcattcagccaatcacgcgcacc
gtcctgcgcgtgcgcctcagcatcacccccgacttcaggtggaatgaccaggtccacggg
tcggtgggagagccctggtggttatgggtggaggaccccatcaacgaccacatctaccac
tccgagtacttcctcctgcagaagaaacaggtgttgagtggagagcctcagcagctggtc
ttcaccatccccatctttgagcccatgccttcccagtattacatccgagccgtgtctgac
cgctggctgggctctgaagcggtgtgtatcatcaacttccagcacctcattctgcctgag
agacacccgccacacacagagctcttggatctccagccgttgcctgtgactgcactggga
aacagggagtacgagagtctgtacaagttcacgcactttaatcccattcagacgcagatc
ttccacacgctgtaccacacggacaccaatgtcctgctgggagctcccaccggctccggg
aaaaccatcgctgcagagatggccatcttcagggtcttcaacatgtaccccacctccaag
gtggtctacatcgctcctctcaaagctctggtccgagagaggattgaggactggaagatc
agaatcgaagagaagctcgggaggaaggtggttgagttaacaggtgacgttactccagac
atgcgggccatagcgcaggcggacctgatcgtcacgactccagagaagtgggacggagtg
agccggagctggcagaaccgcagctacgtgcagaaagtggcgattctcatcatagacgag
atccatctcctgggtgaggacagagggccggttctagaggtcatcgtgtccagaaccaac
tttatctcatcgcacacctcaaaatcagtccgtgtggtgggactctcgacagcgctggct
aatgctcgcgatctagccgactggctgggcatcggacaggtgggactgtttaatttccgg
ccctctgttcgcccagtgccgttggaggttcacatccagggttttcctgggcaacattat
tgccctcggatggccagcatgaacaaaccagtcttccaggccattcgcacacattctcca
gccaaaccggtcctcatatttgtgtcctcacgccggcagacgcggctcacggcgctggac
ctcattgcgtttctggctacagaagatgaccccaaacagtggctccaccaggatgagaga
gagatgaccgatatcatttccactgcaagagactcaaacctgaagctgacgctggcgttc
gggatcgggatgcatcacgcaggacttcacgagcgggataggaagaccgtggaagagctc
ttcgtcaactgtaagatccaggtgttgatagcgacgagcacactagcgtggggcgttaac
ttccccgcacacctggtgatcgtgaagggcacagaatactacgacgggaagacccaccgc
tacgtggattaccccataacagatgttcttcagatgatgggtcgagcgggacggccccag
ttcgatgaccagggcaaggctgttatccttgtgcatgacatcaagaaggacttctataag
aagttcttgtacgagccgttccctgtggagtcgagtcttctgagtgtcctctccgaccac
ttgaatgcagaaatcgcagcaggaacagtcgcctcaaagcaagacgccatggattacatc
acctggacgtacttcttccgcaggctggtcatgaacccgagctactataatttggatgac
accagccatgaaaccattaacaaatacctttcaaccctggtggagaggagcctgagagac
ctggagtgctcgtactgcatggagatacagcaggacgggcagaccatcgacccgctgacc
tacggtcgcatcgcatcctactattacctgaaacaccagaccatccgcatgttcaaagag
cgtctgaagccggagcttcccgtccaggatctgctggccgtcctgtcggaagccgaggag
tacgccgagctcccggtccggcacaacgaggaccagttgaacagtgaactggcccagcgg
ctcccaatcccggtgaacccgcactcctacgacagcgcacacaccaaaacacacctgctc
ctgcaggcccacttcagccgcgcacaactgccctgcagcgactacagcaccgacaccaaa
acggccctggacaacaccatacgcatctgccaggctatgctggatgtggtggcgaatgaa
ggatggctcgtgtctgcgctcagcatttgtaacctcgtgcagatgatcattcaggcccga
tggcttcacgattcctccctgctcacaattcctcacattgagaagcaggatctctacgtc
ttcaggaggtggagcggtggatatcgaggcccaatcgagagtcttcccgagctaatcgct
gcgtgtgacgggaagcaggacaacttcacgtcgatggtgaaggagatcctgcagcccaat
cagatctctcaggcatggctgtacgtgagtcagctgcccgtggtggaggtcagtctgagt
gtgaagggctggtgggaagagtgtgtggagcaaacggagcgatcgatcccctcgagtgtg
tccaacatccgggacgagtccagctggctgtcactgcacgcggatcaggagtacgtccta
caggtgtccctgcgcagactcaacaccggccagcagagaaggaggcaggacagcagggct
caggcgccacgcttccccaaacccaaagatgaaggctggttcctcgttctcggggaggtt
gagaagaaagatctgctggccatcaaacgcgtgggattcatacgcaaccgcagcagtgtg
tccgtggccttctacacgccggagaagacggggaagtgtatctacacgctgtacctgatg
agcgacagctacctgggcctggatcagcagtacgacctccgtctgaacgtccagccggcc
agcatctcagcgcaggtcaacaccgagatctcagagagcagaaccggcccaaagtga
DBGET
integrated database retrieval system
