Squalius cephalus (European chub): 307172161
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Entry
307172161 CDS
T11930
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307172161 (sall3a)
03036 Chromosome and associated proteins [BR:
scep03036
]
307172161 (sall3a)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
307172161 (sall3a)
Chromosome and associated proteins [BR:
scep03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
307172161 (sall3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_6
IZUMO
TDBD
UBZ_FAAP20
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
307172161
NCBI-ProteinID:
XP_079750378
LinkDB
All DBs
Position
15:complement(37573293..37585065)
Genome browser
AA seq
1325 aa
AA seq
DB search
MSRRKQAKPQHLRSDEEPEPVLLPGHVSGEGVEDSDSGNESRSGSEETHVCEKCCAEFFK
WSDFCEHLNTCTKNPLVLIISDNEVTSEPAQDYVPEPSPVPSSEPAESEDDPGGSLIPHA
EADEGADMMLDPGAVLEKEDEPMEVELSPEKPTDSEDQVTLAEPDISLPQLEDHTQSSGA
GYSIPSTNVTLETLHGTRVAVAQFSQGARGALAGEVSTMAIPMILDQLMALQQQQLHQLQ
LIEQIRSQVALINKQAPTQTTVNHQVDHSMNAALHVTSSSSIPTMSGQLHLRGFITPPVH
QLPIKGPSTLNGQVSASLSSALEGACSNVPQTGGQLASSGMKSNITMSSLYPTASNVVPS
QMPPCSVSISSSGCTSSSTGTGAEVSCCISLPRNTPSPLTLTHGRLLTSPSSLPLVPHSS
PNSVIFPNPLASIAATTNALDPLSALMKHRKGKPPNVSMFDTKPSSEDPFFKHKCRFCAK
VFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVPEY
LDNVPTSSGIPYGMSFPPEKPVTTWLDSKPVLSTIPTSVALQLPPTMPSILGNYGDSTSF
TPLSRSPQRPSPPSSECTSLSPNHLIAEASIAQISSSPQPNVASGTPPVLKPEAFHLPPN
SPTRPGETSISISSIPQVISTTTVTTTTRTQITDSTNTPSAVSHPSLQMMSSQFKPKFPF
GGLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRIHTGERPFKC
KICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNT
PLPESFQDMDTDLSFDEKSLDTMSNYDDELLDEMDQVTEDETCLKEGNGDSPKQLNLYSD
MSPSTSPPTSLISSIVALENEMKLSDPTVNVTHSFSLKPQENGSEIDGENGDMFKNDSSS
TMGDLENHSVGSPAQSESSGSMQALSPTYSQPESHRFEPPRVESPPQANSGKDEALHSAS
VSATVKSEQSDTPSPGAENTGALDLTATQPNRPFVKDENHFSLLFLGRDRGLNTPSIMSS
ESSTVKYENGHSKPPALCEGPHLPVGPQVPTATPHTTISPNLAPMLAPPPPRRTPKQHNC
HSCGKNFSSASALQIHERTHTGEKPFGCSICGRAFTTKGNLKVHMGTHMWNNAPARRGRR
LSVENPMALLGGDAIKFSEMFQKDLTARAINVDPGFWNQYAVAITNGLAMKNNEISVIQN
GGIPPIPISLSGGGIPAVGGLSAGMERSHTGSSSPGNTLDKTNLEVGAGHPFSRFREKDK
EIGIN
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcggaagcaagcgaagccccagcacctgcggtcggacgaggagcccgagccg
gtcctgctgccgggtcacgtctcaggtgaaggagtggaggattcagacagtggaaatgag
agccgcagtgggagcgaagagacccatgtgtgtgaaaagtgttgcgctgagttctttaag
tggtcggatttctgtgaacatctgaacacctgtaccaagaacccacttgtgttgattatc
agtgataatgaggtgacttcagagccagcccaggactacgtgcctgagccatccccagtg
cccagcagcgagccggccgagagcgaggacgaccccgggggaagcctcatcccacacgct
gaagcggatgaaggagcagacatgatgctggatccgggggctgtcctggagaaagaagac
gagcccatggaagtggaactgtctcctgagaagcccacagattctgaagatcaagttaca
ctggcagagccagacataagcctacctcagcttgaggaccacacgcagtcctccggggcg
gggtactccattcccagcactaacgtcacgctggaaaccttacatgggacccgtgtggcg
gtggcccagttctctcagggtgcccgaggagctctagctggtgaagtgtccactatggcc
atccccatgatcctggaccagctcatggccttgcagcagcaacagctccatcagcttcaa
ctcatagagcagattcggagccaggtggcgctaataaacaaacaagcccccacacagacc
actgtcaaccatcaagtagaccacagcatgaatgctgccttacacgtaacctcatcctcc
agcatacccactatgtctgggcagcttcatctacgtggcttcatcacaccccctgtgcat
cagcttcctatcaagggaccctccactttaaacggacaggtctcagcctcattatcttca
gctctggagggagcctgttccaatgtccctcagacaggtggccaactggcgagttctggg
atgaaaagcaatatcacaatgagttccttgtatccaacagccagtaatgtggttccctct
caaatgccaccatgctcagtgtcgattagcagcagtggctgcaccagtagtagcacagga
actggggctgaagtcagttgttgtatttcactaccaaggaacacacctagtcctttaacg
ctgactcatgggagattgctaacatccccctccagccttccccttgtacctcacagctcg
cccaacagtgttatcttccctaatcctctcgccagtattgcagcaactacaaatgctctt
gatcctctttccgccctaatgaagcaccgcaaaggaaagcccccaaatgtctctatgttc
gacaccaaacccagttcagaagatcccttcttcaaacacaagtgcagattttgtgctaag
gtgtttggaagtgacagtgccctgcaaattcaccttcgttctcatactggtgaaaggcct
ttcaaatgcaacatttgtggtaatcgcttctctacaaagggtaacttaaaggttcatttt
cagagacacaaagaaaagtatcctcacatccaaatgaacccctatcctgttcctgagtat
ttggacaatgttccaactagctcaggtataccttatgggatgtcctttcccccagaaaaa
cctgttaccacatggctggacagcaaacctgttttgtctacaatcccaacatcggtagca
ctgcaactccctccaactatgcccagtattctaggaaactatggggattcaactagtttc
acccctttaagtcggtcacctcaaaggccatcaccgccatcaagtgagtgcacatctttg
tctccgaatcacctcattgctgaggccagtattgcacaaatttccagttcaccacaacct
aatgtggcgagtggcacacctccagttctcaaacctgaagcctttcatctaccacccaac
tcccccaccaggcctggagaaaccagcatatcgatttcttccataccccaagtgatttct
acaaccacagttacaaccacaaccagaacacagatcacagactcaacgaatactccatct
gctgtctctcatccctccctacaaatgatgtccagtcagtttaagcccaagtttcctttt
ggtggcctcctggactctatgcaaacatcagagacctcaaaactacagcaactggtggaa
aatattgataagaagatgacagaccccaaccagtgtgttatctgtcatcgtgtgctcagt
tgtcagagtgccctgaagatgcactatcgcatccatacaggagaaagaccctttaaatgt
aagatatgtggtcgtgctttcacaaccaagggtaatttgaaaacacactttggggttcac
agatcaaagccccctctccgggtacagcactcttgccccatatgccagaaaaagtttact
aatgctgtagttttgcagcaacacatccgcatgcatatgggtggacagattcccaacaca
cccctgcctgagagttttcaggacatggacacagatctgtcctttgatgaaaagagctta
gacaccatgagcaactatgatgatgagctactcgacgagatggaccaagtaacggaagat
gaaacatgtctcaaagaagggaatggggattcaccaaaacaactcaatttatactcagat
atgtctccaagcacctctcccccaacctctctaatctctagcattgttgctttggagaat
gaaatgaagctgagtgacccaacagttaacgtaactcattccttcagcctaaagcctcaa
gaaaatgggagtgaaattgatggggaaaatggagacatgtttaagaatgactcatcttcc
actatgggagacttggagaaccacagtgttgggagtccagcacagtctgaatcctctggc
tctatgcaggctctgtctcctacctacagccagccggagagccatcgcttcgagccaccg
agagtcgagtcccctcctcaggcgaatagcggcaaggacgaggctctgcattctgcttca
gtgagtgcaacagtgaagtctgagcagtcagacaccccttctcctggagcagaaaacaca
ggcgcattagatctcactgccacacagcccaacaggccatttgtcaaagatgagaatcac
ttcagtctgctgttcctgggaagagacagaggtttaaacactcccagtattatgagctca
gaatcaagcacagtgaaatatgagaatggacacagtaaaccaccggccttgtgtgaggga
ccccacttaccagttggcccccaggttcccaccgcaacccctcacacaacaataagcccc
aacctggctccaatgctggctccgcccccaccccgccggacccccaaacaacacaactgc
cactcctgtgggaagaacttctcgtctgccagcgctcttcagatccacgagcgcactcac
actggagaaaagccattcggctgctccatctgtggcagagccttcaccacaaagggaaat
ctgaaggtccacatgggaacccacatgtggaacaacgccccggcccggcgggggagacgc
ctctccgtggagaacccaatggctcttctagggggagatgccataaagttcagcgagatg
tttcagaaggatctcacagctcgagcaatcaacgtagacccaggcttctggaatcagtat
gctgtagccatcaccaatggactggcaatgaaaaacaatgagatctctgtcattcagaat
ggagggattcctccgattcccattagtctgagcggcggaggcattcctgctgtgggagga
ctgtccgcagggatggagaggtctcacaccgggagcagttctcccgggaacacactcgac
aagaccaacctggaagtgggagctggacaccccttctccagattcagggaaaaggacaaa
gaaattgggattaattga
DBGET
integrated database retrieval system
