Squalius cephalus (European chub): 307172502
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Entry
307172502 CDS
T11930
Symbol
clcn7
Name
(RefSeq) H(+)/Cl(-) exchange transporter 7 isoform 1
KO
K05016
chloride channel 7
Organism
scep Squalius cephalus (European chub)
Pathway
scep04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
307172502 (clcn7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
scep01009
]
307172502 (clcn7)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307172502 (clcn7)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
scep04040
]
307172502 (clcn7)
Protein phosphatases and associated proteins [BR:
scep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
307172502 (clcn7)
Membrane trafficking [BR:
scep04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
307172502 (clcn7)
Ion channels [BR:
scep04040
]
Chloride channels
Chloride channel (CLC)
307172502 (clcn7)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307172502
NCBI-ProteinID:
XP_079751051
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Position
1:complement(42117293..42136013)
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AA seq
795 aa
AA seq
DB search
MANIAKKVSWSGRGEDRGERTPLLNGAEDGKYNRKLSGGGIFHIGRLSTVDLEEEITPEE
DIVRSRPKEIPHNEKLLSLKFESLDYDNSENQLFLEEERRMSHMGFRCLEIRRWVICGLI
GFFTGLIACMIDIAVESLAGYKYFVVKQNIDKFTELGGLSISLILWAVFNSAFVMVGAIA
VAFIEPIAAGSGIPQIKCYLNGVKIPRVVRLKTLVVKVFGVICSVAGGLAVGKEGPMIHS
GAVVAAGVSQGRSTSLKKDFKMFEYFRRDTEKRDFVSAGAAAGVSAAFGAPVGGVLFSLE
EGASFWNQMLTWRIFFASMVSSFTLNFFLSIYHNKAGELSSPGLINFGRFDSDTVQYNLY
EIPLFIIMGALGGMLGALFNLLNNWLTIFRIRYVHRPCLQVMEAMLVAAVTATVSFTLIY
FSNDCQPLGPDHTEEYPLQLFCADGEYNSMATAFFNTPERSVRSLFHNPPGTYDPVTLGI
FTLAYFLLAVWTYGLTVSAGVFIPSLLIGAAWGRLFGILLSVIASSQSIWADPGKYALMG
AAAQLGGIVRMTLSLTVILVEATGNVTYGFPIMLVLMTAKIVGDYFVEGLYDLHIKLQSV
PFLHWEAPATSHWLTAREVMSSPVTCFNRVEKVGTIVDVLSNTSTNHNGFPVVTHTTGHD
EPGKICGLILRSQLIVLLKHKVFVERASSRLIQRKLQLKDFRDAYPRFPPIQSIHVSQDE
RECMMDLTEFMNPTPYTVPQETSLPRVFKLFRALGLRHLVVVDNENRVVGLVTRKDLARY
HMGKDGLEELHLAQM
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatcgcgaagaaagtgtcatggtctggccgaggcgaagatcgcggagagaga
acgccactgctgaacggtgccgaggatgggaaatacaacagaaagttatctgggggaggt
atatttcatataggcaggctgagcactgtggaccttgaggaggaaatcacacccgaagag
gacattgtgagaagtcgaccgaaggaaatccctcacaacgagaagctgctgtccctcaaa
tttgagagtcttgattatgataacagcgagaatcagttgttcctggaggaagagagacga
atgagtcacatgggttttagatgtctggagatcaggcgatgggtgatctgtggtctgatt
gggttcttcactggtctcatcgcatgcatgatagacattgctgtggagagtcttgctggg
tacaagtactttgtagtcaaacaaaacattgataaattcacagagctcggaggcctgtcc
atctctcttatactgtgggcagtgtttaactctgctttcgtgatggttggcgccatcgct
gttgcttttattgagcccattgctgcaggaagtggaatccctcagataaaatgctacctg
aatggagtgaaaatccctcgtgttgttcgactaaagactctggtggtaaaggtctttggt
gtgatctgctcagttgctggaggtcttgctgttggaaaggaagggcccatgattcactca
ggagcagtggtggctgcaggagtatctcaaggcagaagcacttcactgaaaaaagatttt
aagatgtttgagtatttccgcagggacacagagaagagagactttgtctcggcaggagca
gcggctggagtctccgctgcctttggagcccccgttggtggggttctgttcagtttagag
gaaggcgcatctttctggaaccagatgttgacttggagaattttctttgcttcgatggtc
tccagcttcacacttaattttttcttgagtatttaccataacaaggctggagaactctcc
agccccggtctcattaactttggccgctttgacagtgatactgtgcaatataatttatat
gaaattcctctcttcattatcatgggagctttaggagggatgcttggggcattgttcaat
ttgctcaataattggcttacaattttcagaataaggtacgttcaccggccgtgcctgcag
gtaatggaggctatgctggttgcggcggtgaccgctacagtttcctttactttgatctat
ttctccaatgactgccagccattgggaccggaccacactgaggaatatcctctgcagctc
ttctgtgctgacggtgaatataattccatggccaccgccttcttcaacacacctgagcgg
agtgtaaggagtctgttccacaaccctccaggaacgtacgaccccgtgactttagggatc
ttcactctagcctatttcctcctggctgtctggacgtatggtctgaccgtgtcggcagga
gtgttcatcccctctctgctcattggagcagcctgggggcgactctttgggatccttttg
tctgtcatcgcttccagccaatcaatttgggcggatcctgggaaatatgctctgatgggt
gctgcggcccagcttggtggcattgtcagaatgacactcagtctcactgtaatcctggtg
gaagccaccgggaatgtgacctatggctttcccatcatgcttgtgctgatgactgccaaa
attgtgggggattactttgtagagggcctgtatgacctccatattaagctgcagagtgtt
cctttcctccactgggaggctcctgctacttctcattggctgacggccagggaggtcatg
agctctccagtcacctgctttaacagagtggagaaggtcggaacgattgtggacgttctt
agcaacacatccaccaatcacaacggcttcccagtggttacccatactactgggcatgat
gagccaggcaaaatctgtggacttattctccgctctcagcttattgttcttctcaaacat
aaggtgtttgtggagagggcatcttcacgtctcatccaaaggaagttacagctgaaggac
ttcagagatgcatatccacgtttccctcctattcagtccatccacgtctctcaggacgag
agggagtgcatgatggacctcaccgagttcatgaacccgaccccatatactgtgcctcag
gagacttcactccctcgtgtgtttaaattgtttcgggcgctaggactgagacatctggtg
gtggttgataatgagaacagagttgtggggctggtgactcggaaggatcttgcacgctac
cacatgggtaaagatggcctggaggagcttcacctggctcagatgtga
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