Squalius cephalus (European chub): 307172529
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Entry
307172529 CDS
T11930
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor isoform 1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
scep Squalius cephalus (European chub)
Pathway
scep04010
MAPK signaling pathway
scep04020
Calcium signaling pathway
scep04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
307172529 (ntrk1)
04020 Calcium signaling pathway
307172529 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
307172529 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases
307172529 (ntrk1)
Enzymes [BR:
scep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
307172529 (ntrk1)
Protein kinases [BR:
scep01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
307172529 (ntrk1)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307172529
NCBI-ProteinID:
XP_079751085
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Position
15:5809518..5837624
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AA seq
797 aa
AA seq
DB search
MAERRVVQIVVLLLVLVAPALSGCPSACRCSFAMLQCLELDGITSIPALAPQESENVTEI
YIENQANLENITDIDLANYRELKNLTVTDCGMVYISENAFQHNFKLQYVNLASNLLMHIS
WRVFHSVPLLSLILRDNPLTCSCDIYWLQQWHRKRQSDIDSQQNCIYNGNSIQLDSFEMD
NCSVPEVKIDPPTLTTQEGGNLTFTCLVTGVPTPTIRWRTEHLLSSWTLQQVIWGSTLEL
VLHMRSVSSGDNLHNLTCEAENRAGMDEATVQLDIEFPVRILFLRDPEPQHHWCIPFAVD
SNPPATIKWLYNNTPLIETRYTYTELIRDATDGSVQHGCLFLNKPTHLNNGNYTLIVENK
LGRDQATAKGMFMLNPFDPFDPEGIIPVHPDEPTLPTNQSTETEKLETRVFGVSVAVGLA
VFACTFLLIMVVVINKCGQHSKFGIHRSSVLGTEDDLAVSLRFMNFGASPPSSDDSTLDS
GLSSFVENPQYFCGIIKDKDMCVQNIKRKDIILKWELGEGAFGKVYLAECANLCPDTDKM
LVAIKTLKVASESTRQDFQREAELLTVLQHEHIVRFYGVCTDGEPLAMVFEYMRHGDLNR
FLRAHGPDARILDEMKVPLMGQLTLPQMLQIAAQIASGMVYLASLHFVHRDLATRNCLVG
EGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFGVVLWE
IFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHLLMQGCWQREPQQRLVIKDIYN
RLVALVKSPPVYLDILE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgtagggtggtccagattgtggttttgcttcttgtcctggttgcaccagcc
ctgagcggatgcccaagcgcctgtcgctgttcgtttgccatgctgcaatgcctggagttg
gacgggatcaccagcatcccggcgttggcgccacaggagagtgaaaacgtcactgaaatc
tacatagagaatcaagcaaacctggagaacatcacagacatagacctcgccaactacaga
gaactgaagaacctgacggtcacagattgtgggatggtgtatatctctgaaaatgccttc
cagcataatttcaagctgcagtatgtaaacctggcctctaatttactaatgcacatcagt
tggagggtgtttcattcggtccctctgttgagtctaattttgagggacaatccactcacc
tgctcatgtgacatttactggcttcagcaatggcatagaaaaagacaaagcgatattgat
tctcaacaaaactgcatctacaatggcaacagcattcagctggattcatttgaaatggat
aattgtagtgttcctgaagtcaaaattgaccctccgacactgaccactcaagaaggtgga
aacctgacatttacctgtctggtgactggagtaccaacgccgactatccgctggagaaca
gagcatctactgtccagctggaccctgcagcaagtaatctggggatcaaccctggagctg
gttctccacatgaggagcgtgtcttctggagacaacctgcacaatctcacctgtgaggcg
gagaatcgcgcgggaatggatgaagccacggtgcagctggatattgaatttccagtgcgg
atcttgtttctgagggacccagaaccacaacatcactggtgtatcccatttgctgtggac
agcaatcctcccgccaccatcaaatggctgtacaacaacacgcctctcatcgaaacccgc
tacacctacaccgaactgatcagagacgcgaccgatggctccgtccaacacgggtgtctg
ttcctcaacaagcccacccatctgaacaacggcaactacacactcatcgtggagaataaa
ctgggtagggaccaggctacggcaaaggggatgttcatgctaaatcctttcgaccccttt
gacccagagggcatcattcctgtccaccctgatgagccaacacttcccaccaaccaatca
acggagacggagaaactggagaccagagtgtttggggtgtcagtagcggtgggtctcgct
gtgtttgcgtgcacatttcttctcatcatggttgttgtcatcaataaatgtggacagcac
tccaagttcggcatccaccgttcgtctgttctaggcactgaggacgatctggccgtgtct
ctccgcttcatgaacttcggggcaagtcctccatcttcagatgacagcacgctggattct
ggcttgtccagttttgtggaaaacccgcagtatttctgtggcatcatcaaagacaaagac
atgtgtgtccaaaacattaaaagaaaagacattattttgaagtgggaactgggtgaagga
gcttttggcaaggtttacctggcagaatgtgccaacctttgtcctgatactgacaagatg
ctggttgctatcaagaccttgaaagttgccagcgagtccacccgacaggacttccagcgc
gaggccgagctgctcacggtgctgcagcatgaacacatagtgcggttctacggtgtgtgt
acagacggagaacctctggccatggtgtttgagtacatgcgacacggagacctcaaccgc
tttctaagggctcacggtccagatgctcgtatcttggacgagatgaaggttcctctgatg
ggtcagctgacccttcctcagatgctccaaatcgcagctcagatcgcctcgggcatggtg
tacctcgcttcccttcattttgtccacagagatctggccaccaggaactgtttggttgga
gaagggctggtggtgaagatcggagactttgggatgtcgagagacatttacagcactgat
tactacagggtcggtgggaggacgatgttgcccattcgctggatgccgccagaaagcatc
atgtacaggaagttcaccacggagagtgacatctggagctttggagtggtcctttgggaa
atcttcacctacggcaaacaaccgtggtatcagctatccaacagtgaggccattgagtgt
atcacgcagggacgagagcttgaacggccacgtacctgcccaaaggaagtgcacctcctc
atgcagggctgctggcagagagaaccacagcagaggctcgtcatcaaggacatctacaac
cgcctcgtggccctcgtcaagagcccgccagtctatctggacatcctggagtag
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