Squalius cephalus (European chub): 307172727
Help
Entry
307172727 CDS
T11930
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
scep Squalius cephalus (European chub)
Pathway
scep03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
307172727 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scep01002
]
307172727 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scep03021
]
307172727 (taf2)
03036 Chromosome and associated proteins [BR:
scep03036
]
307172727 (taf2)
Peptidases and inhibitors [BR:
scep01002
]
Metallo peptidases
Family M1
307172727 (taf2)
Transcription machinery [BR:
scep03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
307172727 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
307172727 (taf2)
Chromosome and associated proteins [BR:
scep03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
307172727 (taf2)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307172727
NCBI-ProteinID:
XP_079751427
LinkDB
All DBs
Position
15:complement(27400023..27447559)
Genome browser
AA seq
1193 aa
AA seq
DB search
MNRKKDKGFESPRPYKLTHQVVCINNINFQRKSVIGYVELTIFPTVMNLNRIKLNSKQCR
IYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGNGELSIKVP
SELWKQGDEMKVMKVYIEFSLDQPKGGLHFVVPDVEGSMAERSAHVFSFGNQNSSRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETVYTNDMRKKTYHYMLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHTMSYLHEIFEFYEEILTCRYPYACFKTVFVDE
AYVQVSSYASMSIFSTNLLHSAMIIDQTPMTRRFLAYALAQQFFGCFISRMSWSDEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVEYELKMGGVLLHPTFSGGKDKDNPTPHL
HFSIKHPHTLSWEYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLVSTSGFLKSISNVSGKDIGPLIKQWVDQSGVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRFERDVVAQEEAISALEK
FPTPASRLALTDILEQDQCFYKVRMQACFCLAKIANSMMSTWNGPPAMKSIFTRMFCCKS
CPNIVKTNNFINFQTYFLQKTMPVAMALLRDVQNLCPREVLSFILDLIKYNDNRKNKFSD
NFYRAELIDALTNSLTPAISINNEVRTVDNLNADVRLILEEITRYLNMEKLLPSYRNTVT
VSCLRAIRMLQRNGHIPSDPSLFKAYAEYGHFVDVRIAALEAVVDYTRVDRSSSELQWLL
DLVQNDPVHYIRHEILSMLAKNPPFTKAVDSSLCNEALVDQLWKLMNSGTCHDWRLRCDA
VNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKSEQGPGGPEVTPNMTFTSILK
EEHVVMEPALSGVAMAPQGLKRKAETPLGSSPEPGQVMQEEPSAKAPVKSKEEEDIDMDT
VHDSQAFIYHHLNMLERPSTPGKEPSSVEQAILSMPGTPMPTLSKESTSAKYGDHHHHHH
HHHEHKKKKKKHKHKHKHKHKHESKDKDKDRDSHAFSNSPASGRSIRSPSLSD
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcaagaaagacaagggctttgagagcccacgaccatataaactaacccaccag
gttgtctgcattaacaacataaattttcagaggaagtctgtcattggttatgtggagctg
accatctttccaacagtgatgaacctgaaccgtattaaactgaacagcaaacagtgccgt
atctacagagtgagagtgaatgatcttgaggctccattcatttacaatgaccctacgctg
gaggtctgccatcatgaatccaagcagaggaacctgaactatttctccagtgcttacaca
gcagcggttagtgctgtggatccagatgctgggaatggggagctttccattaaagttcct
tctgagctctggaaacagggagatgagatgaaagttatgaaggtgtacattgaattctca
ttggatcaaccgaaaggagggttgcattttgtagtacctgatgtggaaggaagtatggca
gaaagatcagcccatgttttctcctttggcaaccagaattcctcacggttctggtttcca
tgtgtagactcatactctgagctgtgcacatggaagcttgagttcacagtggatgcttcc
atggtggcagtgtcctgtggggacctagtggagacagtctacaccaacgatatgcgcaag
aagacctaccactacatgctgcccatccccactgcggcccctaacatttccctggctgtg
gggccctttgagattctagtggacccctacatgcatgaggtgactcatttttgcttgcct
cagcttctgcccctgctgaagcacaccatgtcctacctgcatgagatttttgagttctat
gaggagatcctcacctgtcgctacccatatgcttgcttcaagaccgtctttgtggacgag
gcttatgtgcaggtctcatcatatgcatcaatgagtattttcagtaccaacctcctgcac
agtgctatgatcatagaccagacacctatgaccaggcgctttctggcttatgctctggcg
cagcagttttttggttgcttcatctctaggatgtcctggtctgatgagtgggttttgaag
ggaatttcaggttacatttatggcctctacctgaagaaaacatttggagtcaatgagtat
cgtcactggattaaggaggaactggacaagatcgtggagtatgagctaaagatgggtgga
gtcctgctacatcccaccttctctggtggaaaagataaagacaatccaacaccccacctg
cacttttccatcaaacacccccacacattgtcctgggaatattacaagatgttccagtgc
aaagcccacctggtcatgaggctcattgaaaaccgaataagcatggagttcatgttacag
gtgtttaacaagctcttgagtctggccagcacagcctcatcccagaaatatcagtctcac
atgtggagccagatgttggtatccacctctggattcctcaaatccatttccaacgtctca
gggaaggacatcggacccctcatcaaacaatgggtagaccagagtggggtggtaaaattc
tttggaagttttgccttcaacaggaaaagaaatgttttggaactagagatccgtcaggac
tacacttcgtctggcacacagaaatatgtgggccctattaaagtgacagtgcaggaattg
gatgggtcatttaaccacacattgcagatagaggagaacagtctcaaacatgacattccc
tgccactccaaaagcagaaggaacaagaagaagaaaatccctctaatgaatggagaggaa
gtagacatggacttgtcagccatggatgctgactctcctctgctgtggatccgaattgat
ccagacatgtccatcctgcggaaggtagagtttgaacaggctgatttcatgtggcagtac
caactacggtttgagagggatgtagtggcccaggaggaggctatttcagcgttggaaaaa
tttcccactcctgcgtcacgacttgctcttacggatatcctagaacaagaccagtgcttt
tataaagtccgcatgcaggcctgcttctgtcttgctaagattgctaattccatgatgagc
acctggaatgggcccccagccatgaagtctatctttacacgcatgttctgctgcaaaagc
tgcccaaatatcgtcaagaccaacaacttcattaatttccagacctacttcctgcaaaag
actatgcctgtggccatggctctgctcagagatgttcagaacctttgtcccagagaggtc
ctgagttttatactggacctcatcaagtacaatgacaaccggaagaacaagttttctgat
aatttctatcgtgctgagctgattgatgccctgacaaattcactgactcctgccatcagc
attaataatgaggtgcgcacagtggacaacttgaatgcagatgttcgcctgatcttggag
gaaatcacacgctaccttaacatggaaaagctgctgccaagctaccgtaacaccgtaaca
gtcagttgcttacgggccattcgcatgctacagaggaacggccacatccctagtgacccc
agcctgttcaaggcctacgctgagtatggccactttgtggatgtgaggattgcagcactg
gaggctgttgtagactatacaagagttgataggagttccagtgaactgcagtggcttctg
gatctggtacagaatgacccagtccattacataaggcatgagattctcagcatgcttgcc
aagaatccacctttcaccaaagcagtggattcttcgttgtgtaacgaagctttagtggac
caactatggaagctgatgaactcaggtacctgtcatgactggcgtttgcgatgtgatgcc
gtaaatctgtactacactctgtttgggctgacccgaccctcctgtctgccgttgccagag
ttgggtctcgtgctgaacctgaaggagaaaaaagctgttctcaaccccaccattaaatct
gagcagggccctggtggcccagaggttaccccgaacatgaccttcaccagcattctgaag
gaggagcatgttgtcatggagccagcattgagtggtgtggccatggccccacagggatta
aagaggaaggcagagactccattaggttcatctcctgaacctggacaagttatgcaagag
gagcccagtgctaaagcaccagtgaagagcaaagaggaggaagatattgatatggacaca
gttcatgacagccaggcattcatctaccaccatctgaacatgttggagagaccttccact
ccagggaaggaaccatcttcagtagagcaagccatcctgtctatgccaggaacacccatg
cccacactgagcaaagagagcacatctgccaaatatggagatcaccaccaccaccatcat
catcatcatgagcacaagaagaagaagaaaaagcacaaacacaaacataaacacaaacac
aagcatgagagtaaggataaagataaagacagagattctcatgcttttagtaacagccct
gccagtggccgctccattcgttctccatctctgtctgactga
DBGET
integrated database retrieval system
