Squalius cephalus (European chub): 307172902
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Entry
307172902 CDS
T11930
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307172902 (rnf115a)
04121 Ubiquitin system [BR:
scep04121
]
307172902 (rnf115a)
Enzymes [BR:
scep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
307172902 (rnf115a)
Membrane trafficking [BR:
scep04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
307172902 (rnf115a)
Ubiquitin system [BR:
scep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
307172902 (rnf115a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-Nse
zf-ANAPC11
zf-C3HC4_3
DUF8608
C1_2
HypA
Motif
Other DBs
NCBI-GeneID:
307172902
NCBI-ProteinID:
XP_079751774
LinkDB
All DBs
Position
15:complement(20901982..20914142)
Genome browser
AA seq
310 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNSLDDTAS
QFAELWQLLFVERPFSLDLESPDSERVPGGGSGSGSLGAGPFGGSVPGGLSGTLGGPLSV
AEHWGPGRPPRLHTQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIITQEHTDCNMECPV
CKEDYTVGEPVRQLPCNHFFHSDCIVPWLELHDTCPVCRKSLNGDESGTQSSSEPSSLNT
DPRTPERWSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggtccctccgcatcgcttcttctgtcactgttgtaaaggtgaa
gtgagccccaaactgccggagtatatctgtcccagatgtgactcgggcttcatcgaggag
gttacagaagactccagtcttctggacagtagctcaaatagccttgatgacacagcttca
caatttgctgagctatggcagctgttgttcgtggagaggccgttcagtctggatctagaa
agtcctgactctgagcgggtccctggagggggcagtgggtctgggagtctcggagccgga
ccgttcggcggttctgtcccaggtgggcttagtgggactctgggtggccctctaagtgta
gcagagcactggggtcctggtcgtcctcctcgcctgcacactcagaggaggtaccgatcc
agaggaagcagtcggccggatcgctctcccgctgtcgagggaatagtacagcagtttctc
gcaggcctttttgccaattcaggagtaccaggctctcctccgctgtcatggacgggcatg
cttcactcaaaccccggggactacgcctggggacagggaggtctggatgcagtcatcaca
cagttactgggtcagtttgagaacactggtcctcctcctgctgagaaagagaaaatttcc
tccctccccactgttatcatcactcaggaacacactgactgcaatatggagtgccctgta
tgtaaggaagactatacggtcggtgagccggtccggcagctgccctgcaaccacttcttc
catagtgactgcatcgtgccctggcttgaactgcacgacacgtgtcctgtgtgcaggaag
agcctgaatggggatgaaagcggcactcagtcctcgtcagagccttcctccttaaacact
gatcctcgcacaccagagagatggtccttctga
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