Squalius cephalus (European chub): 307173025
Help
Entry
307173025 CDS
T11930
Symbol
otx2a
Name
(RefSeq) homeobox protein OTX1 A isoform 1
KO
K09326
homeobox protein OTX1
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scep03000
]
307173025 (otx2a)
Transcription factors [BR:
scep03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
307173025 (otx2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
307173025
NCBI-ProteinID:
XP_079751952
LinkDB
All DBs
Position
2:complement(19386758..19444176)
Genome browser
AA seq
335 aa
AA seq
DB search
MKLSLWSSTMMSYLKQNPYAMNGLGLSGATMDLLHPSVGYPTNPRKQRRERTTFTRTQLD
ILENLFAKTRYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSSGNSKIRPAKKK
PSPSRESPGSESSGHFTPPAVSSSSSSSSSGSNPSGLLINSSSSGTTPVSSIWSPAPVSP
LPAPPSLPDISPPASASCMQRAISGAGGSTGVPSYPMPYNQAPSYAQGYPTSNAASYFGG
MDCGSYLAPMPGHAHHHPHAHHTQLSTAPHHHIGQSHPHQGYGGTGLPFSSSDCLDYKDY
KEQAAVASSWKLNFSSAAADCLDYKDQAAWRFQVL
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtctctctggagctcaacaatgatgtcatacctcaaacagaacccgtatgcc
atgaacgggctggggctcagcggggcaaccatggacctccttcatccctctgtgggatat
ccgacaaatcctcgtaaacagagaagagagagaaccacgttcactcgcactcagctggac
atactggagaacctgttcgctaagacgcgctacccagacattttcatgcgtgaggaggtg
gccctgaaaatcaatttacccgagtcaagagtgcaggtttggtttaagaacagaagggcg
aagtgtcggcagcagcagcagagcagcggcaattcaaagatccgtccggcgaaaaagaaa
ccctctccgtcccgtgagagcccggggtcagagagcagcggccacttcactcctcccgcc
gtctcctcgtcgtcctcgtcttcgtcctcaggctccaacccctccggccttctgatcaac
agctcgtcctcaggaacaacacctgtctcgtccatctggagtcccgctccggtctcgcct
ctccctgctcccccctcgctacccgacatctcccccccggccagtgcgtcctgcatgcag
agggccatctcgggcgccggcggctccacgggagtgccgtcgtatcccatgccctacaac
caggctcccagctacgcccagggctacccgacctcgaacgccgcctcttatttcggaggc
atggactgcggatcctacttggcgcccatgccaggtcacgcccaccatcacccgcacgcc
catcacacacagctgagcaccgccccgcatcaccacatcgggcagagccaccctcaccag
gggtacggcggcactgggctgcctttcagctcctcagactgtctggattacaaagattac
aaagagcaggctgccgtggcatcatcgtggaaactgaacttcagttccgcggcggccgac
tgcttagactacaaagaccaggccgcctggcgttttcaggttttgtaa
DBGET
integrated database retrieval system
