Squalius cephalus (European chub): 307173286
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Entry
307173286 CDS
T11930
Symbol
slitrk6
Name
(RefSeq) SLIT and NTRK-like protein 6
KO
K25837
SLIT and NTRK-like protein 6
Organism
scep Squalius cephalus (European chub)
Pathway
scep04514
Cell adhesion molecule (CAM) interaction
scep04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
307173286 (slitrk6)
04517 IgSF CAM signaling
307173286 (slitrk6)
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRR_LRWD1
DUF6984
LapA_dom
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
307173286
NCBI-ProteinID:
XP_079752412
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All DBs
Position
2:complement(60185838..60204705)
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AA seq
815 aa
AA seq
DB search
MLARIVFVCSFFAGASFGDTESKVLYDGACKSLCTCEETDGQLYINCEESNISKMSDVKV
PSDKPFHLNLYNNDLVELLATDMDAFKNVVTLHLGENSIQELEPGVFSALGSLRKLHINR
NYLVMLKEDTFHGLVNLEYLQADTNFIRVVEPGAFSKLVRLKVLILNDNEIEFLPSNIFR
FVPLTHLDLRGNKLQTLPYVGFLEHIGRIIELQLEENDWVCNCEILHLKVWIENMRAQSS
IGEVVCNRPEALRGTSLARVKRDSLCPSHADINLEEPSKSLDMVVTPSTKVVQIPNAKDD
AKIPTPANGLGPCVTVGFLMHCEDRGVQRISDLGILQQSPTMLVLTGNMIQRLFKYDFVT
YDSLELLNLANNQIDYIDNETFLSLSNLKKLHLNGNRIEKISATMFLGLHNLENLYLEYN
VIKEIEAGSFNPLTNLKLLYLNNNRLNTLPAQIFRNVPLVKLNLRKNVFMHLPVSNALDQ
LKYLEQIYLEDNPWDCTCDLVSLKQWVEKLSKETVVGAILCHTPKKLSTAEVRNLKHDVL
CPGLVTYKSLPGGTEDSIPVTTAPEGGTSGFFRSITDAVPLSVLILCLLILFLTVIFCAA
GIVVFVLHRQRRHAKKKQAEEQPRESSPIHLHYSMYGQKTTHHVTERQGPSMYDEPSHSP
IIQVCRNPSYCSQHKDYELDDYDSDKPKHICHSILDKDNESLPNVKFRAVTDYPAEFVSL
GDASSLYKNILERERELQQLSLTEYLRKNISQLQPAVDMQVPNHHKELKLMETLVYTRPR
KVMVEQTKNEYFELKANLHAEPDYLEVLEHQTTFN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgctggccaggattgttttcgtttgctccttctttgctggtgctagttttggagatact
gagtctaaggtgttgtacgatggagcttgcaaatctttgtgcacctgtgaagagacagat
ggacagttgtacataaactgtgaggagagcaacataagcaaaatgtcagatgtcaaagta
ccgtcagataaaccttttcatctaaatctatacaacaatgacttagtggagttacttgca
acggatatggatgctttcaagaacgtcgtcaccttacatctcggtgaaaacagcatacag
gagcttgaacctggtgtgttcagtgcgctgggatccctgagaaagttgcacataaacaga
aattacctggtcatgctgaaggaggacacatttcacggcttagtaaatttggaatacctt
caggctgacaccaactttatccgggtcgtggagcctggggccttcagcaagcttgtccgt
cttaaagttctgatcctcaatgacaatgagattgagttccttccgagcaacattttccgc
tttgtgcctctgacacatttggatctgcgagggaacaagctgcagacactgccgtacgtg
ggtttcctggagcatattggtcgtatcattgagctccagttggaggagaatgactgggtg
tgtaactgcgaaatcttacatttaaaggtctggattgagaacatgcgagcgcagtcatcc
attggcgaggtggtttgcaacaggcctgaagctcttaggggcacctctttggctagggtc
aaaagggattcactttgcccctctcatgctgacatcaacctcgaagagccatcgaagtct
ctagacatggttgtcaccccatccactaaggttgttcagataccgaatgccaaagatgat
gcaaagatacctacacctgcaaacggcctagggccttgtgtcacagtgggttttttgatg
cactgtgaggaccgaggtgttcaaaggatatctgatctaggaattcttcaacaaagccct
accatgctggttttgacaggaaatatgatacaaagacttttcaaatatgattttgtgaca
tacgacagtttggaattgctcaatttggcaaacaaccaaatagactacattgacaatgaa
acctttctgagtttgagcaacctgaaaaagctgcacctgaatggaaacaggatagagaaa
atatctgcaacaatgtttcttggccttcacaacctggaaaatttgtacttagagtataat
gtgatcaaagagattgaggctggatcgttcaaccctttgacaaatctaaagctcctgtac
ctaaacaacaaccgactcaacactctccctgcacaaatatttcgtaatgtgcccttggtg
aaattaaacctaaggaaaaatgtctttatgcacttaccggtgagtaatgcgttggaccag
cttaaatatttggagcagatttatcttgaggacaatccttgggactgcacttgtgatttg
gtcagcctcaaacagtgggtggaaaagcttagcaaagaaacagtggtgggtgccatctta
tgccacactcctaaaaaactgtctactgctgaggtcagaaacctgaagcatgatgttctg
tgccccggcttggtaacctataagtccttacctggaggcaccgaggacagtatcccagtc
acgactgcaccggagggcggcaccagcggcttcttccggtcaattacagatgcagtgcca
ctatcggtgctcatcctctgccttctcatcctcttcctgaccgtcattttctgcgctgcc
gggattgttgtgtttgtgctacaccgtcagcggagacatgccaaaaagaaacaggccgag
gagcaacctcgcgagagcagtcccatccacctgcactacagcatgtatggccagaaaacc
acccaccacgtaactgaaaggcaaggacccagcatgtacgacgaaccttcccatagcccc
atcattcaggtctgcaggaaccccagttactgctctcagcacaaagactacgagttagat
gactacgatagcgataaacctaagcatatctgccatagcatccttgacaaggacaacgaa
tccctccctaacgtgaagttcagggccgtcaccgactaccccgctgagtttgtaagtttg
ggagacgcgagctccttgtacaagaacatcttagaaagagaacgggagctccaacagctc
agcctcaccgaatacctcaggaaaaacatatcacagctacaaccagctgtggacatgcaa
gtccccaaccaccacaaagagctgaaactaatggaaactctcgtttatacgaggccgagg
aaggtcatggtggaacagactaaaaatgagtactttgagctcaaagccaatttacatgcc
gaaccagactatttagaagtcttagagcatcaaacgactttcaactga
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