Squalius cephalus (European chub): 307173620
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Entry
307173620 CDS
T11930
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
scep Squalius cephalus (European chub)
Pathway
scep04510
Focal adhesion
scep04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307173620 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
307173620 (rapgef1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RAPGEF1_N
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
307173620
NCBI-ProteinID:
XP_079752976
LinkDB
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Position
16:complement(6851726..6880301)
Genome browser
AA seq
1084 aa
AA seq
DB search
MSGKIDSKQESQRSHLTSFTMKLKDKFHSPKIKRTPSNKKSKPPPEQPVKSPEKTVTKSL
SRLEEHEKEVVSALRYFKTIIDKMVVDKKVLEMLPGSASKVLEAIMSLVQFDGKTLSSSR
VSSCLSRLYQSLANLIRWSDQVMLEGVNLEDKEIVATVTTVIKAVLDGVKELVKVAIEKQ
EHPSPTTPVKTLPPVTSPKRVPEPPITESKETVLNETPTPAEATETPNDVPDEEMAPPKP
PLPGLKVPEHCPPALPPKKRQSAPSPTRIAVVAPMSRTTSGSSLPIGIFRQEYEADALQR
RFSGGSHSYGGESPRLSPCGSIGILSRSDEQLSSLEQDSGQCSRNTSCETLDTAESYDPD
YDFLHQDLSSIDQIPPAHTGGCLSPLPESHHESSSSPVQFQSIPPALPKKERRPPQPQVE
RLYSQYDNVPDEDVQTPPFPLFASMPPSNPGEFMGSFGPAENTQIPQSPPPLPEKKSRHI
LKYMQFMEDYSEPLPSVFYQTPQSESIYEQRNRKRFQEVYGLSDSFSSSDETLPPPALPP
KQRQLASSHSASPSSSSSSSLSCQLQQCASGPVPGETETALSLSASNSSLNRQGTLPVTT
SESANDEGGEGEYVNLYSSNQANGDVTLSNGDSSCGAEDSLQDSESENSKDPADREGWKQ
KCGDSELTSEEVDELSLIDHEEIVSRLTLKQENDDGPDVRAGSGDILLVHATETDRKDRV
LYCEAFLTTYRTFLTPEDLIKKLRYRYTRFSLSSDIIKQRSSKNTFFVLVRVVDELCLVE
LTEDILKQLMELVFSLLCKGELTLARVLRKNILDKVQQKKLLQYTNSLKTLAARGVAARP
GTLHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWV
RSLIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEG
LEEYCTLIDSSSSFRAYRAALADVEPPCIPYLGLILQDLTFVHLGNPDLINGKINFSKRW
QQFNILDTMRRFQQVHYDLKHNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTER
EEKT
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaaaatagacagtaagcaagaatcccagcgttcccacttgacatcctttaca
atgaaactaaaggacaaattccattctcccaaaatcaagaggacgccatcaaacaaaaag
tccaaaccaccaccagagcaaccggtgaagtccccagaaaagactgtgaccaagagtctg
agtcgattagaggagcatgagaaagaagtggttagcgccttgcgatatttcaagactatt
atcgacaagatggtggtggacaagaaggtcttggaaatgcttcctggttctgctagcaaa
gttttggaggccatcatgagcttggtacaatttgatggcaagacactgagcagttcaaga
gtgtcctcctgtctcagtcgactctatcaaagtcttgcaaacctcattcgctggtcggac
caagtgatgctggaaggggtgaatttggaagataaagaaatagttgcaactgtcaccact
gtgatcaaagcagtgttggatggtgtgaaggagctggttaaagtcgccattgagaagcag
gaacacccctcccctacgacacccgtcaaaaccctgcctcctgtcactagtccaaagcgt
gttccagagcctcccatcactgagtcgaaggaaaccgtcttgaatgagacccctacccca
gccgaggccacagagaccccaaatgatgtccctgatgaggagatggcccctcctaaaccc
cctctacctggactcaaagtgcctgaacattgtccaccggctctccccccaaagaagcgg
cagtcggcaccgtctcccacgaggattgctgtggttgcgccaatgagtcgtaccacaagt
ggatcaagtcttcctattggtatctttcgacaggaatatgaggcagatgccttacaaagg
cgtttttcaggaggtagtcactcctatggaggggaatcaccacgactgtccccatgtggc
agcatcggcatattgagcaggtcagatgaacagctgtcctctttggagcaggacagtggt
cagtgctctcgaaacaccagctgtgagactctagacacagcagagagctacgaccctgac
tatgacttcttgcatcaggacctgtctagcattgaccagatccctcctgcacacacaggg
ggttgcctgagcccgctccccgagtctcaccacgaatcatcctcctcccctgttcagttt
cagtcgataccacccgctctcccgaagaaggaacggcgaccccctcagcctcaggtggaa
cgactgtactctcaatatgacaatgttccagatgaggacgtccaaaccccacccttcccc
ctcttcgcttcgatgccaccctcgaaccctggagaattcatgggaagcttcggccccgct
gagaacacacagatccctcagagccctccacccctgccggagaagaagagtcggcatatc
ctgaagtacatgcagtttatggaggactattccgagccgctgccttccgttttctaccag
acgcctcagagcgaaagcatttatgagcagcgcaataggaagcgctttcaggaagtgtat
ggcctcagcgactcgttcagcagcagtgatgagaccctccctccaccagcgctgccaccc
aaacagagacaactggcttcctcacactctgcgtctccttcctcctcctcttcctcctct
ctgtcatgtcagctgcagcagtgtgcatccgggcctgtccctggtgagacagaaaccgct
ctcagcctttccgcatctaactcctctctgaaccgccagggcaccctgcctgtcactacg
agcgaaagtgctaatgatgaaggtggggagggtgaatacgtcaatctgtattcatccaac
caagccaatggagatgtgactctctccaatggagactcttcttgtggtgctgaggactca
ctccaggactcagagtcagaaaacagtaaagatccggccgacagagagggctggaagcag
aagtgtggagactcagagttgacctcagaagaggtggacgagctctccctgatagaccat
gaagagatcgtgtctcgcttaacactaaagcaagagaacgatgacggccctgatgtcaga
gctggatcaggcgatattttattagttcatgccaccgaaacagatcgcaaagatcgagtt
ttatactgtgaagctttcttgaccacataccgaacatttctaaccccggaggacctcatt
aaaaagctccgctatagatataccagattttctctcagctctgatatcatcaaacaacga
tctagtaaaaacaccttcttcgtgctggtgcgcgttgtggacgagctttgtttggtggag
ctgacagaagacatcttgaagcagctcatggagcttgtgttcagtctgttgtgtaaagga
gagctcaccctggcacgggttctgcgcaagaacatcctagataaagtccaacagaagaag
ttgctgcagtacactaattccctcaaaacactggctgcgcgaggtgtggctgccaggccc
ggcactctgcatgacttccgtagtcatgagatcgcagaccagctgactctccttgatgcg
gagctgttttataagatagagatcccagaggtgttactttgggcaaaggaacagaatgag
gaaaaaagccccaatctgacccagtttacagagcacttcaacaacatgtcatactgggtt
cggtccttaataatacagcaggagaaagcccaggatcgtgaaaaacttcttctaaagttc
atcaaaattatgaagcacttaagaaaactcaataacttcaactcctacttggcaatatta
tcagcgttggattcagcgcctatcagaagactggaatggcagaagcaaacgtcagagggt
ttggaggaatattgcactttaattgacagttcctcctccttccgggcgtacagagcagct
ttggcggatgtggagcctccatgcataccgtatctaggtctcatcctccaggacttaacg
tttgtgcatcttgggaatccagacctcattaatggaaagataaacttttccaaacgctgg
cagcagttcaatatcctggacactatgaggcgcttccagcaagtgcattatgacctcaaa
cacaacgacgacatcgtctccttcttcaacgacttcagtgaccatctagctgaggaggca
ttgtgggagctttctttgaagatcaagcctcgcaacatcactcgccggaaaacagaacga
gaggaaaagacatag
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