Squalius cephalus (European chub): 307174297
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Entry
307174297 CDS
T11930
Symbol
iqsec2a
Name
(RefSeq) IQ motif and SEC7 domain-containing protein 1 isoform 1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
scep
Squalius cephalus (European chub)
Pathway
scep04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
307174297 (iqsec2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307174297 (iqsec2a)
Membrane trafficking [BR:
scep04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
307174297 (iqsec2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
MYCBP_helical
SlyX
Motif
Other DBs
NCBI-GeneID:
307174297
NCBI-ProteinID:
XP_079754166
LinkDB
All DBs
Position
16:complement(12545527..12625471)
Genome browser
AA seq
1570 aa
AA seq
DB search
MDAGQGSPESPNRAVEYLLELNNIIESQQKLLETQRRRIEELEVQLDRLSQENKDLRLDR
QPCPPPPPPPIHPVLPPKSHAASSTAVYANLSLNSGPIPIPVPAPAPPPPPPPVPPRDRR
VNANTHTRLGQSLSAGPNSTERERDRDRGRERDGAATSLGSSLQRDGAATSLGSSLQRQT
EGDSSNKDSVEGDPQCPDTTSFTDSTCSQGPYLGNSDRYGNIRNIPGPQGPPVAPSSPAS
LAWAQRTRHQPASLALRKQEEEESKRCKALSDSYELSTDLQDKKVEMLERKYGGYFLSRR
AARTIQTAFRQYRMNKNFQRLRSSASESRMTRRIILSNMRSQYSFDERQPQVQPQTPQQQ
QGRYTSHHTSTPGTAGQAGTTDTQQETDSPGHCPSDREEYSHADDAFNKQVTSLANSMDD
TLTCQSGRGDSQDGGGGGGDESEDFGECVWSNKPTSRRGVLGEQERLGVMHEDSTATSYS
DVTLYMDDGMPCSPLSIERVPSSTDTEYWGISSGVGGREDSRDTEGGGSNNSRRSTPCTE
CRDFRLRGSHLPVLTIEPPSDSSVDMSDRSDRGSLSRQLLYEQEPTTGGSPQGTLKHNPA
PRTPNPCAAQGQTRPQGRPIPSPLPTHLPHHAMMHQHHHPHLHHPLHHHPLPHIHHPYPD
PTSPSPTQPPLTPLSSSSSAPLPPTGLEHSDGDNDSLNSTTNSNETINCSSGSSSRDSLR
EPLPPLGKQTYQRESRHSWDSPAFNNDVVQRRQYRIGLNLFNKKPEKGIQYLIERGFVSD
TPVGIARFILERKGLSRQMIGEFLGNRQKQFNKDVLDCVLDEMDFSGMDLDDALRKFQAQ
IKVQGEAQKVERLVEAFSQRYCVCNPALVRQFQNPDTIFILAFAIILLNTDMYSPNVKAE
RKMKLEDFIKNLRGVDNGQDIPRDLLVGIYQRIQKWELRTNDDHVSQVQAVERVIVGKKP
VLSLPHRRLVCCCQLYEVPDPNRPQRSGVHQREVFLFNDLLVVTKIFQKKKTSVTYSFRQ
SFPLVEMQVHMFQNSYYPHGIRLTSAMPGSERKVLIVFNAPSQQDRTRFTSDLRESIAEV
QDMEKYRVESELEKQKGVMRPGLMSGDVGGVGGMKTEAVNGTLGRPSLDDTYAAGEGLKR
TALSSSLRDLSETGKRGRRNSVGSLDSTIEGSIINSPQPHQRLPMGGAVPSCYGLEDYRP
HRPILSPGVGVGGGPGQLHNAIGNIGGVPGINDRGGGPGSSSGGSNSGSFLGSLFGSKRA
KPPAPLIPPGPHYPAPVPPPTTGGPPPPSPSALSQSDPGGPSKIQALHAQYCHNNFGQPP
PPYHHHHRYHVQVATPGHPPIHHTLQRGSLPRRGPPAPSHAQLQQQLSHHAMQQGRYGNM
ACTPPPLSPHSPHSPIAPFNFYHVHPNTIRHVRVPGPTGKLPLTLSHSQPHPHAHSHVHS
HTHSHPVHAHSPHPLLHHSAHQTHFVFSPPPQAPSAITARHIPQGPAHYIPQYPPLSSIP
PPPPHSPLPPPSPHTPLTPLTPLSPLAPQLPGPMGVLSGGPGGGGGGGASNSSTVGSSKS
KPINRISTVV
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggccagggcagcccggagagcccgaaccgggcagtggagtacctgctggag
ctcaataacataatcgagagccaacagaagcttctggaaactcaacggcggcgcatcgag
gaactggaagtgcagctggaccgactcagccaggagaacaaagacctgaggctggaccga
caaccctgcccacccccacctccacctcccatccaccctgtcctgccaccaaagtcccat
gctgcatcctccaccgctgtgtacgccaatctgagcctcaacagcgggcccatcccaata
cccgtcccggctccggcgcccccgcccccacctccacccgtgccaccacgggatcgccgt
gtcaatgccaacacgcacacaaggctcggccaaagcctgtcagctggacccaattccaca
gagagagaaagggaccgagacaggggacgagaacgagacggcgctgctaccagtttggga
agctctctgcagcgagacggcgctgctaccagtttgggaagctctctgcagagacagaca
gaaggagactcctccaacaaagacagtgtggagggagatcctcagtgtccggacacaact
agctttaccgacagcacctgcagtcagggcccatacctgggcaactcggaccgctacggg
aacattcgaaacattcccggccctcaggggcctcctgtggccccttcaagtccagcgagc
ctggcctgggcgcaacggacccgccaccaacccgccagcctggcactccgcaagcaagag
gaagaagagagcaagcgctgcaaagcgctctctgacagctatgagctctccacggacctg
caggacaagaaggtggagatgctggagaggaagtatggcggttacttcctgagcaggcga
gcggctcgcacgattcagacagcattccggcagtatcgcatgaacaagaactttcaacgg
ctgcgcagttccgcctcagaaagccgaatgactcgccgcatcatcctatcaaacatgcgt
tcgcagtactcgtttgacgagcgacagccacaggttcagccccaaacgccccagcagcaa
caaggtcgatataccagccatcacacttcaactccaggaacagctggccaggcaggaacc
acagacacacagcaggagactgactcacccggacactgtccttcagacagagaggaatac
tcgcatgcagatgacgccttcaacaaacaggtgacctctctggctaactctatggacgac
actctgacgtgtcagtcaggtcgaggtgattctcaggatggtggtgggggaggcggcgac
gagagcgaggatttcggagagtgtgtgtggagcaacaaacctacctcacgtaggggggtc
ttgggggagcaagagcgtctaggggtcatgcacgaggacagcacagccacctcgtacagc
gatgtcacactttatatggacgacggcatgccgtgttctccgctatctattgagcgggtt
ccctctagcacagacaccgagtactggggcatcagcagtggggttggaggccgcgaagac
agccgggatacagagggtggcgggagcaataacagtcggcggagcacgccgtgcaccgaa
tgcagagatttccgcttgcgtggttcacaccttcctgttctcaccatagagccgcctagc
gacagctccgttgacatgagcgaccgttcagatcgaggctccctcagcagacagctgctt
tacgagcaggagcctacgacgggcggatcaccccaagggactctcaaacacaaccctgca
cctcgcacacccaatccctgcgcagcacagggccaaacacgaccacagggtcgccccatc
ccatcccctctgcctacacacttaccgcaccacgctatgatgcaccagcatcaccaccca
catcttcaccatccactgcaccaccaccctttgccacacatccatcacccctacccagac
cccacgtctccctcacccacccaacctccactcacacctctttcttcctcatcctccgcg
cccctgccccctactggcctggagcactcggatggggacaacgactccctgaactccacc
accaactccaacgagaccatcaactgcagctcaggctcttcgtctagggacagtctgagg
gaaccgttgcctcctctaggaaaacagacctatcagagagagagcaggcatagctgggac
tcacctgccttcaacaacgacgtggtacagagaaggcaataccgcatcggtctcaacctc
ttcaacaagaaaccagagaaggggatccagtatttgatagagaggggttttgtctcagac
acacctgtgggcattgcccgcttcatcctggagagaaaaggcctaagtagacagatgatc
ggggagtttctgggaaatcgacaaaagcagttcaacaaggatgtgttggactgtgtgttg
gatgagatggacttctcgggtatggatctggatgacgccctgaggaagtttcaggctcag
attaaggttcagggggaagcccagaaggtggagagactggtagaggccttcagtcagaga
tactgcgtgtgcaaccctgcacttgtccgccagtttcagaacccagacactatcttcatc
ctggcatttgccatcatcctcctcaacacagacatgtacagccccaacgtcaaagctgag
aggaagatgaagctggaggattttatcaagaaccttagaggagtggataatggacaggac
attcccagggatttgttagtgggcatctaccagcgcattcagaaatgggaactcaggaca
aatgatgaccatgtgtctcaagtgcaggctgtagagagagtcatcgtgggcaagaaacct
gtgctttctctgccacatcgcaggctagtgtgctgttgtcagctgtatgaagtccctgat
cccaatcgaccacagcggagtggagttcaccagcgggaggtcttcctctttaatgacctg
ctagtggtaacgaagatttttcagaagaagaagacgtctgtgacgtacagtttcagacag
tcctttcccttggtggagatgcaggttcatatgttccagaactcctactatcctcacggt
atcagactgacatcagcaatgcccggcagtgagcgtaaggttttgatcgtgttcaatgcg
ccgagccagcaagaccgaacacgcttcaccagcgacctgcgtgagagcatcgctgaggtt
caggatatggagaaataccgtgtagaatctgagttagagaagcagaaaggtgtaatgcgt
ccagggctcatgagtggagatgtgggcggggttggcggaatgaagactgaggctgtgaac
ggcactctgggaaggcccagtctggatgacacgtacgcagcaggggaggggcttaaacga
accgcacttagctcctcactgagagacctctctgagacaggaaagcgaggccgtagaaac
agtgttggctctttggatagtaccattgaaggatccatcattaacagtcctcagccgcat
cagcgtttgcccatggggggcgctgttcccagctgctacgggctggaagactaccggcct
caccgccccatcctgagccccggagtaggggtggggggtgggccggggcagcttcacaat
gccataggcaatatagggggggtccctggcatcaacgatcgaggtgggggtccggggagc
agttctggagggagcaattccggttccttcctgggctccctgtttgggagcaagcgcgcc
aaaccccctgctccccttattccccccgggccacattacccggcccccgtgccacctcct
actacaggaggaccgccgcctccgtccccctccgccctcagccagtcagaccccggtggg
ccttccaagatccaagcgctgcatgctcagtactgtcacaacaactttgggcagcctccg
cccccctaccatcatcatcatcggtatcacgtgcaggtcgccacccctggccacccaccc
atccatcacaccctacaacgcgggtccctcccacgacgagggccgcccgctccttcacac
gcccagctccagcagcaactatcccatcatgctatgcagcaaggccgttatggcaatatg
gcatgcactccaccgcctctgtccccgcattcgccccattcacccatcgcccctttcaac
ttctaccacgtgcaccccaataccatacgccacgtacgggtgcccggtcctaccggcaag
cttcctcttactctgtctcactctcagccccaccctcacgcccactcccacgttcactct
catacccacagccatcccgtccacgcccacagccctcaccccttactgcatcactccgcc
catcaaactcatttcgttttctcgccgccccctcaggcaccatccgccatcaccgcccgg
cacataccccagggccccgcccactacataccacagtacccgcctctttcctccattccg
cctcctccaccacattccccattaccacctccgtcaccacatacccctctcacccctctt
accccgctctccccactagctccgcagctcccgggacccatgggggtgctgtcaggcggc
ccagggggcggaggcggaggcggagccagcaacagcagcacggtcggcagctccaaatcc
aaacctatcaaccgcatcagcacggtggtgtga
DBGET
integrated database retrieval system
