Squalius cephalus (European chub): 307174470
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Entry
307174470 CDS
T11930
Symbol
chm
Name
(RefSeq) rab proteins geranylgeranyltransferase component A 1
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
scep01006
]
307174470 (chm)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307174470 (chm)
Prenyltransferases [BR:
scep01006
]
Protein prenylation
Rab geranylgeranyltransferase
307174470 (chm)
Membrane trafficking [BR:
scep04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
307174470 (chm)
Endosome - Lysosome transport
Rab GTPases and associated proteins
307174470 (chm)
SSDB
Ortholog
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GFIT
Other DBs
NCBI-GeneID:
307174470
NCBI-ProteinID:
XP_079754434
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Position
17:24102669..24168673
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AA seq
666 aa
AA seq
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MCSFKMATEDLPSQFDVVILGTGLTESVIAAACSRVGQSVLHLDRRNYYAGNWASFTFNG
LLSWIEEYKKQQEVQIAESEQVWRSLIDEGEDVMPLSSVDSSISNLEVFCYASEEEEKDE
TKTPLTSCQPVNAETESEETKGGSTEAQDTFTGDDATESNAKTQNEEHQEQHTSEIAEPS
QSQEEKEPQPISSPADPPVEVEKKITYQKLLKEGRRFNIDLVSKLMYSRGALVDLLIKSN
VSRYAEFKNISRILTCRNGKVEQVPCSRADVFASKQLTVVEKRMLMKFLTFCLDFEQHPE
EFQDYSEKPFSEFLKNKKLTENLQDFVLHSIAMVTQQTLTEEGLKATQHFLRCLGRYGNT
PFLFPLYGLGEIPQCFCRMCAVFGGIYCLRHSVQCLVVDKGSNKVKAVIDTRGQKISCSH
FVVEDSYIRDEQRQSTAYRQISRAVLITDRSVLPSESDQQISLVTIPPLGSSAPAMRMVE
LCSSSMTCMPGTYLVHLTCSSSGTAQEDLASVVSQLFDIPAIPGEEPSGGFEERSKPAVL
WVMYFNMRDTSAQDSSSYSLPSNVHVCTGPDSSLGSDYSIKLAESVFHHLLPDEDFCPPA
PNPEDIIYDGDGPQAEGSGFDESNNTEEDKSQAEEEKSPSTESSEPAEMDSVTQETPLDT
SPPSEE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagtttcaagatggctacggaggatctcccatctcaatttgatgttgtcattctc
ggaacaggcctcaccgagtctgtcattgcggcggcctgctccagagtcggacagagtgtt
ctgcatttggacaggaggaactactatgctggaaactgggcaagcttcacattcaatggc
ctgctctcatggatcgaggaatataagaaacagcaggaggtacagatcgcagagtcggag
caagtatggcgaagcttgattgatgagggagaggatgtgatgcctctcagctccgtggac
tcctctatttccaacttagaagttttctgttatgccagtgaggaagaagagaaagacgaa
acgaagaccccgttaacaagctgtcagccagtgaatgctgagactgaatcagaagagacc
aaaggaggctctacagaggctcaagacacgtttacaggtgatgacgccacagaatccaat
gctaagacccagaacgaggagcatcaggagcagcatacatctgagattgcagaacccagc
caatcacaggaagagaaagagccgcagccaatcagcagccctgcagacccacctgtggag
gtggaaaagaagataacatatcaaaagttattaaaagaaggacgcagattcaacatcgac
cttgtctctaagttgatgtattcacgtggtgcattggtggatctgctcatcaaatctaat
gtgagccgttacgcagagttcaagaacatcagccgcatcctcacctgcagaaatggaaaa
gtggagcaggtcccgtgttcgcgagctgatgtgtttgccagtaagcagctgactgtggtg
gagaaacgcatgctgatgaagtttcttaccttctgtctggactttgagcaacacccagag
gagttccaggactactctgagaaaccatttagcgagttcctgaagaacaagaagctcact
gagaacctgcaagacttcgtcctgcactccatcgctatggtgacgcagcagaccctcaca
gaggaaggactgaaggccacgcaacacttcctgcgatgcttgggtcgctacggcaacact
cccttcctgttccccctctacggcctgggagaaatcccacagtgcttttgcagaatgtgt
gccgtatttggaggaatttattgtcttcgacactcagtgcagtgcctggttgtggacaag
ggatccaacaaagttaaagcggtgattgatacacgcggtcagaagatcagctgcagtcat
tttgtggttgaagattcgtacatcagagatgaacaaagacagagcacagcttacaggcag
atatctcgagctgtgctcatcacggacagatctgtgctgccttcagaatctgatcagcag
atctcgttggtgacgattcctcctctgggatcttctgcaccagctatgaggatggtggag
ctctgttcctcctccatgacttgcatgcctggcacctatttggtccacttgacctgttca
tcctctggtacggcccaagaagatcttgcttcagttgtatctcaattgtttgacattccc
gccattcctggagaggaaccttctggaggtttcgaggagagaagcaagcctgcagtgctg
tgggtcatgtacttcaacatgagggacacgtcggcccaggacagcagcagctacagcctg
ccgagcaacgttcacgtctgcaccggtcccgacagcagcctgggcagcgactactccatt
aaactggctgaatcagtgtttcaccatctcctcccggatgaagatttctgtccacctgca
cccaacccagaggacatcatctacgacggagacggcccgcaggccgaagggtcagggttt
gatgagagcaataacaccgaagaggataaaagccaggcggaggaagagaagagtccatcg
actgagagctctgaacctgcagagatggacagtgttacccaggagacaccgctggacacg
agcccaccctctgaagaataa
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