Squalius cephalus (European chub): 307174532
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Entry
307174532 CDS
T11930
Symbol
loxhd1a
Name
(RefSeq) lipoxygenase homology domain-containing protein 1 isoform 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
scep Squalius cephalus (European chub)
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
scep03037
]
307174532 (loxhd1a)
04990 Domain-containing proteins not elsewhere classified [BR:
scep04990
]
307174532 (loxhd1a)
Cilium and associated proteins [BR:
scep03037
]
Other cilia and associated proteins
Stereociliary proteins
307174532 (loxhd1a)
Domain-containing proteins not elsewhere classified [BR:
scep04990
]
Other domain-containing proteins
Others
307174532 (loxhd1a)
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
307174532
NCBI-ProteinID:
XP_079754522
LinkDB
All DBs
Position
17:6067351..6107550
Genome browser
AA seq
2402 aa
AA seq
DB search
MPTKEKKPTETEERDDEGEEKEPTVKGKSKRDAKTRQKSSEEKTASTEALTEKEKRKKSD
SVKEKKKKKKREDVEVTENDDGTDEQNNNEPIGKEKQTKGKSSSEERDGKEVRKEKKKKR
KPSESKEGRDDMGSKEKKSKDGKKKKKSAEEEEDEDAVQEEEEEDKKKKKKDKKKKKGSD
SDEDKKAKKGKKSKVKQVDYAELYQEELMNYHTEESDDQEDEFNKKKVYEVVTITGDVKG
AGTDANVFVTLYGEFGVSPKVHLASKSRTAFEKNKTDVFRIKTHNVGPIKKIRIEHDNTG
MSASWFLDRVIVTDMNRPHLRFFYACNNWLSREEADKLTVRYLLGSLNPMDIPKQNKYIA
SVFTMDAKGSGTDADVYLNIFGEFGDTGERKLVSDGKDTFERANEDKFTIEAPNLGRLRK
ITIGHNNRGSSAGWACDKVVIDDMGNKEVYEFPVDAWFDISEGDGKIQRDVLVGATQPMA
IVYNVQVMTGDIRGAGTDSKIHLVMHGHKGIKNSGKLFLEGGTFERAQIDIFNVELLELL
SPLSRVTIGQDNAGMGCGWYCEKVTVYCPFTGLEQVFPCGRWLDEDEGDGLVERELYEMV
SLRHKKQKKFPWSLWIFTSEIKGAGTDAQVFLQVYGESGKSDEMKLESKSDSFEQGQCDK
YIIEMPDIGKIRKLRIWHEKRNPFSGWHLGRVTLMKTLTREKYSFPCNRWLDINEDDNEI
IRELPATGKLVPEPLPILKYRVTICTGTISGSGTDASVYLNIIGELGDTGERLMFMSKNN
VNKFEKGNADEFLVEAVTLGQIRRVRIGHDGRGGGCGWFLDKVMIREEGQPEASSIEFPC
FRWLDRNEDDGQIVRELVPTDHGQRLFTVGYHIAIKTGSINGASSDSKVFVKMYGEKGDT
NKMLLVVSDNDLGNYFETGQTDIFTIETFDIGKINRLLIGHTNEGLRAGWFLDSVQIWVP
VHGLQYMFPSHRWLCKDEADGKVEVEIYPSETLEIEKLINYEVTVVTGDVWAGGTNANVF
LQIYGEEGKTELIRLKSRSNNFERGTTEIFRIEGLDVGRVYKIRIGHDGTGIGAGWFLEK
VDVKRLIMAMVKPEKKEEEKKDKKKKKKKKEEEEESPGVLKEVVRTFSFPCGRWLARSEE
DGEILVELCAEDFEDLEDNSYEVHVFTGTVLGAGTDAGVYINVYGEMGDSGERKLRKSNH
LNKFERGQEDVFTITGMDLGQLKKLRIRHDNKQANAAWYLDRVEIFDTKDETMYFFPCQR
WLAVDEDDGQLCRELVPVDEAFMKREEDEEEESSPAQLGLEQKAMSTTFTMRVKTGEKKN
AGTDANVFAILYGTKDDTGIINLKASKNYKNKFELGLIDEFTIEAVDIGKLKRIRIGHDN
AGGSPGWFLDWVEIDAPSLGQLLRFPCGRWLDKGEDDGAIVRDLYPNELQTHLYTPFVPY
EIKIFTSDVFAAGTDADVFIILYGQNGVCSSQKSLCVNKRERKMYFERGAEDMFIVELED
IGDIIEKIRIGHDNRGVNPGWHLDRVEIRRLLRKGKGSETAIFPCEGWLARSEEDGETIR
ELVPSDIIVEKLSRDGTLKVIETEVDDALEIHTYTVTVTTGDVYGAGTDANVFITLYGDM
GDTGERKLSKSENTNKFERGSVDTFTLEAVDLGQVFKIRIRHDNSMLSADWYLDQVEVAD
TDTEEVFLFLCERWLSRKREDKRIDRVFYVKGYEGERETAFCPIKKVTNFDSNMNKKNKK
RHSGEDDEEEEGSLIPYHFSVTTGSDRDAGTSSRAYVIIIGKKNKRTDRLWLDLDGKNAF
LPGSLDYFTCYGSDVGEIKTVQLGHDGATPESCWLVDELSVEVPTKAVRYVFRCKCWLAK
DRGDGLTARFLKVQDAETVNIPQKVIYEVTVITGDVQHAGTDTQIYITVFGVYGTSEEIL
LPKLEDRFERGQKDTFNLEIEDIAPLRKLRVRIDGSGSRPDWFLDKVELHNLQTNEVALF
TYEDWLSRSYGPRRTLICEMSAVIDDEEMVELTIYTVSVKTSDSSAAGTDANVWMIIFGE
NGDTGTLALKESNKTNKFERKQMDTFRFPDILSLGELSKVRIWHDNSGLAPGWHLEYVEV
HDDIMDKKFRFQCDRWLAKKEDDGQIMRELACANSDAVDFDEKTKYEIVVKTADTDDAET
KENAWIVLEGKKGRSKEFVMENSTKKKRFLRGASDRFEFSSKELGDIASICLGHIPKDGK
KVKVEASWFVEEVVVTETELGNKYIFRCDAAIPLSSKRDEFQTFECTKFIESFTSKAQSL
KPVKYEAIVITGEEKGSGTDANVFITIFGSNGDSGRRQLCQKFRNLFERGQTNRFILELL
DMGDLLRVCVEHDNSGLSPGWLLSRIEITNTANGVTTIFICGKWLDKNKADGRIKRVIYP
KY
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaaaagagaaaaaaccaacagaaaccgaagaaagggatgacgaaggagaggag
aaggagccaacagtgaaaggaaagagtaagagggacgcaaagacgagacagaagagctcc
gaggagaagacagcaagcactgaggcacttacagagaaggagaagagaaaaaagagtgac
tccgtaaaagagaaaaagaaaaagaagaaaagggaagatgttgaggtgacagagaatgac
gacgggacagacgagcagaacaacaatgagcccatcggcaaagaaaaacagaccaaaggg
aaatcctcaagcgaggaacgggacggaaaagaggtaaggaaagagaagaagaagaagcgc
aaaccatccgaaagcaaagaaggacgagacgacatggggtccaaggagaaaaagagcaaa
gacggcaagaaaaagaagaagtcggccgaggaagaggaggatgaggacgccgtgcaggag
gaggaagaggaggataagaagaagaagaaaaaagataaaaagaaaaagaaaggttctgac
agcgacgaggacaagaaagcaaagaaggggaagaagtcgaaggtcaaacaggtggattat
gccgagctctaccaggaggagctgatgaactatcacacggaggaatcggatgatcaagaa
gatgaattcaacaaaaagaaagtgtacgaggtggtgaccatcacgggtgatgttaagggt
gctgggactgatgctaatgtgttcgtcaccttgtatggagagtttggagtgtctcccaaa
gttcacctggccagcaagagcagaacagccttcgaaaagaacaagactgacgtctttagg
atcaaaactcacaatgttgggccaataaagaaaattagaatcgagcatgataacacaggc
atgagtgccagttggttcctggaccgagtcattgtgactgacatgaataggccacacctc
cgcttcttttacgcctgcaacaattggctgagcagagaagaggccgacaaacttacggtc
cgatatctgttgggcagcctaaacccaatggacattccaaaacagaacaagtacatagcc
agtgtcttcacaatggatgctaaaggcagtgggactgatgctgacgtctatctaaatatt
tttggagagtttggggatacaggagaacggaagctggtcagcgatggaaaggacactttt
gagcgcgctaatgaagacaaattcaccatcgaagcaccaaatctcggcagacttagaaaa
atcaccatcggacacaacaacagggggtcttctgctggttgggcgtgtgataaagttgta
attgatgacatggggaataaagaggtttatgagtttcctgttgatgcatggtttgacatc
tcagaaggggacggcaaaatacaaagagatgtgctcgtcggggccacacaaccaatggcg
atcgtgtataacgtacaggtgatgacgggtgatatccgtggagcgggcactgactctaag
atccacctcgtaatgcacggtcataagggaattaagaacagtggcaagttgttcctggag
ggcggcacgtttgagcgcgcccagatcgacatctttaacgtggagctgctggaactgctc
agcccgctcagtagagtcaccatcggacaggacaacgctgggatgggctgcggatggtat
tgcgaaaaggtgaccgtatactgcccgttcacaggcttagagcaggtctttccctgcgga
cggtggttggatgaagatgagggtgatggactggtggagcgagaactgtacgagatggtc
tcactaagacataaaaagcaaaagaaattcccctggtctctgtggatctttacgtcagag
attaaaggtgccggcaccgatgcacaggtttttctgcaggtgtacggagaaagcggcaag
agcgatgagatgaaactcgagagcaaatctgacagttttgaacagggacagtgtgacaag
tatattattgagatgcccgatatcgggaagatacgcaagctgagaatctggcacgaaaag
aggaatccgttctctggctggcaccttggcagggtgacgttgatgaagacccttactaga
gagaaatactcatttccttgtaaccgttggttggacatcaatgaagacgacaatgagatc
attagagaactgccagctactggaaaacttgtgccagaacctttaccaattcttaaatac
cgcgtgacgatttgcacgggaaccatcagtggaagtggaacagacgccagtgtttatttg
aacatcatcggtgaattaggagacaccggagagcgtctgatgttcatgagcaaaaacaac
gtcaacaagtttgagaaaggaaacgctgatgagtttctggtagaggcggtcacactggga
cagatccggagggttaggattggtcatgatggacgaggcggaggctgtggttggtttctg
gataaggtgatgatcagagaggagggacagcctgaggcttcatccatcgagttcccatgt
ttcaggtggttggatcgtaacgaagacgacggacagattgtgagagagttagtccctact
gatcatggtcaacgtttgttcactgttggctatcacattgcgataaagacaggcagtatt
aatggtgccagctcagattcaaaggtgttcgtaaagatgtacggagagaaaggcgacacc
aacaagatgctgctggtcgtctccgataacgacttggggaactattttgagacgggacag
acggacatcttcacaattgagacctttgacattggcaagataaacaggttgctgattggc
cacactaacgagggcctgcgagctggttggtttctggacagcgttcagatctgggtgccg
gtgcacgggctgcagtacatgttccccagtcaccgctggctctgtaaggatgaggctgat
gggaaggtggaggtggaaatctacccaagtgagactctggagatagagaaattgatcaat
tatgaagttaccgtagtgacaggagacgtgtgggccggagggacgaatgcaaatgtcttc
ctgcagatttatggtgaggaaggaaaaactgaactaatacggctcaagagccgatccaac
aactttgagagaggaaccactgagatctttaggatcgagggcctagatgtggggcgtgtc
tataagatccggatcggccatgacggcacgggaataggggctggatggttcctggagaaa
gtggatgttaaacggctgatcatggcaatggtgaaaccagagaaaaaagaggaggagaag
aaagacaagaagaagaaaaagaagaaaaaggaggaagaagaggaatccccaggggtactg
aaggaggtcgttcgaactttcagtttcccatgtggccgatggctcgctcgtagtgaagag
gatggagagatactcgtcgagctgtgtgctgaggatttcgaagacctagaggacaactcg
tatgaagttcatgtgttcactgggactgtgctgggggccggaaccgatgcaggcgtttac
atcaacgtctatggagaaatgggcgactcgggcgagagaaaactacgcaagtcaaaccac
ctcaacaagtttgagcgcggacaggaggacgtgttcacgatcactgggatggatctgggg
cagctgaagaaactgaggattcgtcatgacaacaagcaggcgaatgctgcgtggtacctg
gaccgcgtcgagatctttgatacaaaagatgaaaccatgtattttttcccgtgtcagcgc
tggttggcagtcgacgaagacgacgggcagctgtgccgtgagttagtgcctgtggatgaa
gctttcatgaagagggaagaagatgaagaagaggagtcgtcgcctgctcaacttggacta
gagcagaaagccatgtcaaccacgttcacaatgagagtaaaaacaggggagaagaagaac
gccgggacagatgcaaatgtttttgccattctttacggaaccaaagatgacacaggtatc
attaatctaaaggcctctaagaactataagaacaagtttgagttgggattaattgatgag
ttcaccattgaggctgtggacatcggaaaactcaagagaatccgcatcggacacgacaac
gcaggtgggtctccaggctggtttctggactgggtggagatcgatgctccgtctctgggt
cagctcctgcggtttccctgtggccgctggctggataaaggagaagatgatggtgccatt
gtcagagacctgtaccctaatgaactgcagacacacctctacactccctttgttccctat
gagattaaaatcttcaccagtgatgtatttgctgcgggaacagacgcagacgtcttcatc
attctgtacgggcagaatggagtgtgttcgtctcagaaatctctctgcgtcaataagaga
gagaggaagatgtattttgaacgaggggcggaggacatgttcatagtagagttggaggac
atcggagatatcattgagaaaatccgcatcggtcacgataatcgtggggtgaatcctggc
tggcatttagaccgtgtggaaattcgcagactgctccggaaagggaagggctctgagacg
gcaatattcccgtgtgagggatggctggctcgctcggaggaggacggcgagaccattcga
gagctggtgccgtctgacatcatcgtggagaagctttcacgagacggaaccctcaaagtc
atcgagacggaggtggacgacgcgctggagatacacacatatacagtgaccgtaaccaca
ggggatgtgtatggagcgggcactgatgcaaacgtgttcatcactctttacggagacatg
ggcgacactggagaacgcaaactcagcaagtctgagaacaccaacaagtttgagagagga
tcggtggatacgttcactttggaggcagtggatctgggccaggtgttcaagatccgcatt
cgccatgacaacagcatgctgagtgctgattggtacctggaccaggtggaagtggcggac
acagacacagaggaagtgtttctgtttttgtgtgagcgatggctctcgagaaagagggag
gacaaacggatcgacagggtgttctacgttaaggggtatgagggagagcgagagaccgcc
ttctgtccaattaaaaaagtgacaaatttcgacagcaacatgaacaagaaaaacaagaaa
cggcattcaggggaagatgacgaagaagaggaaggatcactgatcccctaccacttctcg
gtgacaacgggttcagatcgggatgctgggacgagtagccgagcgtacgtcatcatcata
ggaaagaagaacaagaggacagaccgcctatggctcgacttagacgggaagaatgcattc
ctgcctggatccctggattacttcacctgttatggatctgatgttggcgagatcaagaca
gtgcaattgggtcacgatggggcgacccctgagagctgctggttagtggacgagttgtcc
gtcgaggtgccgactaaagcagtgcgatacgtgttccgttgtaaatgctggttggccaaa
gacagaggagacggactcactgcccgcttcctaaaagtgcaggatgcagaaacggtcaac
atcccacagaaggttatctatgaggtaaccgtgataacaggagatgtccagcatgcggga
acagacacacagatctatataactgtgtttggagtctacggcacatcagaggaaattctg
ctgccaaaattagaggacaggtttgagcgagggcagaaggacacattcaatctggagatt
gaggatatcgctccattgaggaagctgagagtgcgtatagatggttctggaagcagaccc
gactggttcctggacaaggttgaactgcacaacctgcagacgaatgaagtggcgttattt
acgtacgaggattggctgtctcgctcatacgggcccaggcgaaccctcatatgtgaaatg
tctgccgtgattgatgatgaggaaatggtggagctcaccatctacaccgtttctgtgaag
accagcgattcatctgcggctggaaccgatgctaacgtgtggatgattattttcggcgag
aatggtgacactggaacgctagctttgaaagaaagcaacaaaaccaacaagtttgaacgc
aaacagatggacacattccgtttcccagacatcctcagcttgggcgagctctcgaaagtg
cgcatttggcatgacaactcaggtctggctcctggttggcacctggagtatgtggaagtg
catgatgacatcatggataagaagtttcgtttccaatgtgaccgctggctcgccaagaaa
gaggatgatggacagataatgagagagctggcgtgtgccaacagtgatgctgtggatttc
gatgaaaaaaccaaatatgagatcgtggtcaagacagcagatacagatgatgctgaaacc
aaagagaacgcatggatcgttctagaagggaagaaaggacgttccaaagaatttgtaatg
gagaactcgactaagaagaagcgttttttacgaggcgcttcagaccgctttgagttctcc
tccaaggagttgggagacatcgctagtatctgtctgggacacatccctaaagatggcaag
aaagtcaaagttgaagcctcctggttcgtggaggaggttgttgtcacagagacggagcta
ggcaataagtatatcttccgatgtgacgccgccatccctctttcctcaaaacgagacgag
tttcagacattcgagtgcactaaattcatcgagagcttcaccagcaaggcccaaagcctc
aaacctgtaaaatacgaggccattgttatcacaggcgaggagaagggctcaggcaccgac
gccaacgtcttcatcaccatcttcggctccaacggcgactccggccggaggcaactctgc
cagaagttcaggaacctgttcgagcgcggccagaccaaccggtttattctggaactgctg
gacatgggcgacctgctccgagtgtgtgtggagcacgataactccggactcagtcccggt
tggctcctgagcaggatcgaaattacgaacacggccaatggtgtgacgacgatattcatt
tgtgggaaatggctggacaagaacaaagcagatgggaggataaaacgtgtgatctatcca
aagtattga
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integrated database retrieval system
