Squalius cephalus (European chub): 307174618
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Entry
307174618 CDS
T11930
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform 1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
scep Squalius cephalus (European chub)
Pathway
scep04510
Focal adhesion
scep04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
307174618 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
307174618 (rapgef1b)
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Motif
Pfam:
RasGEF
RAPGEF1_N
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
307174618
NCBI-ProteinID:
XP_079754712
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All DBs
Position
17:5540590..5586253
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AA seq
1201 aa
AA seq
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MGNTSRRSQPLLEETEYFNSGEPDTESQKSHLSSFTMKFIKFNSPVKRTLSSKKSKQLQP
EPAVKTPEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMSVDTKVLQMLPGSASKVLEAI
LPLMQVEARVQHSSAMSSCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVATVTTVIKGV
LDGVKELVKLTIEKHEQPSPTSPNKPAPPVTKAESVCENPLTEREKAILSKTTPIVTPTD
SLTDMSEEEAPPKPPLPGLKLAEHRNRMQLCSDPVAGQRRATAMETPPALPPKKRQSASS
PTRVAVVAPMSRGSCGLNLPPGALNQQQEFDVDLLQRRFSGGSQSYGGDSPRLSPCNSMG
KLSKSDEQLSSLERDSGQCSRNTSCETLEGYDPDYDFLHQDLSVSDPLPFPTGTGSSLSP
LPECHGESQSLSPAHAPPTHPRFSAPVTNQASLDYWTPPLTPGQTNRVHPPALPQKKRRS
APILSAYPLYERLPSHYDNLSEEEQPTPPFPLVTPVSPLPQVNGGDELSQYTDADSPPPL
PEKKGKQILQYMQFVEDYSEPQPSVFYQTPQKESIYEQRRNKRFQEVYGFNDSYSSSDSV
HEPVPPPALPPKQRQLASYTSPSSSSSSSFSILPPPAGLVEEAEPALGLSLSVSNSFLSG
HASLTTPVSQSSDPVGSTNAGRALDGGGVSNGSLTSSLVSLAVCLPSESSLSDSLLTSAS
ESVDEGGEGEYVNLYSSTQANGDNTHRTDTSSCDDVLQDHTPHIPTSNSKEALSKDRPKE
PSHGQIDDVDELSLIDHNDIMDRITLKAENDDGPDVRAGSGDILLVHATETDRKDLVLYC
EAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTE
DILRQLMDLVFRLVCNGELSLARVLRKNILDKVEQKRLLRHVHTLKPLAARGVSARPGTL
HDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSI
IIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEE
YCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDFIEGKVNFSKRWQQF
NILDSMRRFQQVHYELKRNEDIVSFFNDFSDHLAEEALWELSLKIKPRNISRRRTEREEK
T
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggggaataccagtcggagatcccaacctcttctagaggagacggaatattttaatagc
ggagagccagatacagaatcccagaagtctcacctctcctctttcacgatgaaatttatt
aaatttaattccccggttaaaagaactctctcatctaagaaaagcaaacaactccagcca
gagcctgcagtgaagactccagagaaacccgtcaacaagaaggtgagtcgattggaggaa
caggagaaggaggtggtgagcgctctgcgttacttcaagacgattgtggacaagatgagc
gtcgatacaaaagttctccagatgcttcctggttcagctagtaaagttttggaggccata
ttgcctctgatgcaggtcgaggctcgggtacagcacagctcggcaatgtcctcctgtcat
aaccgcgtctatcagagtttggcgaatctcattcgttggtccgaccaggtgatgctggag
ggcatcgacctcgacgacaaggacaccgtggcaaccgtcaccacggtgatcaaaggcgtg
ctggatggtgtgaaggagctggtgaaactcacaatagagaaacacgagcaaccgtcgcca
acgtcccccaacaaaccagcgcctcctgtgaccaaagctgagagtgtgtgtgaaaatcct
ctaactgaacgagagaaggcgatcctgagtaagaccacgcccattgtcacgcccactgac
agcttgactgacatgtcagaggaagaggctccgcccaaacctcctctaccaggactcaaa
ctggcagagcacaggaacaggatgcagttgtgctccgatcctgttgccgggcagcggagg
gccacggcgatggaaaccccgcccgctctgcctcccaagaagcgacagtcggcctcctcc
cccacgcgtgttgccgtggtagcgccgatgagtcgaggatcatgtggtctcaacctgcct
cctggagctctaaaccagcagcaggagtttgatgtggatctcctccagaggcgtttctcc
ggcgggagccagtcgtacggtggggattcacctcgtctctctccctgtaacagcatggga
aagctcagcaagtccgacgagcagctctcttcactggagcgagacagcgggcagtgctct
cgcaacactagctgtgaaacactagagggatacgatccggattacgacttcctacatcag
gatctgtccgtctccgacccgttaccgtttcccaccggcactggcagcagtctgagccct
ctcccagaatgccacggggagtctcagtcattaagccccgcccatgccccgcccacccac
ccgcgtttcagtgctcccgtcaccaatcaggcttccctggactactggactccgcccctc
actcctggacagaccaatcgcgtgcatccacccgccctcccccagaagaagcgacgatcc
gcacccatcttatcagcgtaccctctttacgagcgcctcccatcgcactacgataaccta
tcagaagaggagcagcccacgccaccgttcccgctggtgacgccggtgtcgccccttcct
caggtcaacggtggagacgaactctcacagtatacggacgccgacagcccgccgccgcta
ccagagaagaagggcaaacagattctgcagtatatgcagtttgtggaggattattcggag
ccgcagccgtccgtcttctatcagacgccacagaaagagagtatttacgagcagcggagg
aacaagcgctttcaggaggtctacggcttcaatgactcctacagcagctcagactctgtg
cacgaacccgtcccaccgccagcgctgccacccaaacagagacaactggcctcctatacc
tctccttcttcatcctcctcttcctctttttcaattctccctcctcctgctgggcttgtg
gaggaggcggagcctgctcttggtctcagcctatcagtgtctaactccttcctcagtggc
cacgcctctttgaccacacctgtgtcgcagagttctgacccggtcggctcgaccaatgcc
ggcagagctctagatggtggtggtgtctctaacgggtccttgaccagctctctggtctct
ctggccgtctgtcttccttctgagtcttctctttctgactcgcttcttacctccgcgagt
gaaagtgttgatgaaggtggcgagggagagtatgtgaacctgtactcgtccactcaggct
aacggagacaacacacaccgcactgacacctcttcatgtgatgatgtgcttcaagaccac
acccctcacatacccacgtccaatagcaaggaagcattgtctaaggacaggccgaaagaa
cccagtcatggtcagatagatgatgttgatgaattatccctcattgatcataatgacatt
atggaccgcatcacgctcaaagcagagaatgatgatggtcctgatgtgagagccggttct
ggtgatatactgttagttcacgctacagaaacagaccgtaaagatttggtgttgtactgt
gaggcttttctcaccacctacagaaccttcataacacctgaagacctcattaaaaaactt
cactacagatacacacgcttctgtcacagtccagacaccttcaagaagcgtgtcagtaaa
aacacattcttcgtgctggtgagagtcgtggatgaactctgtctggtggagctgaccgag
gacatcctgcggcagttgatggatctggtgtttcggctggtctgtaacggggaactgagt
ctggcgagggtcctgcgaaagaatatcctagataaagtggaacagaagaggctcctgcgg
cacgtgcacacgctcaagcctctcgccgcgcggggcgtctctgccaggcccgggacgctg
catgatttccgcagtcatgagatcgccgatcagctgacgttgctggacgcagaactcttc
tacaagatcgagattcccgaggtgctgctttgggcaaaggaacagaacgaagagaaaagt
ccaaatctgacccagtttacagagcactttaacaacatgagctactgggtgcgctctata
atcatccagcaggagaaagctcaggacagggagaaactgctgctcaaattcatcaaaatc
atgaagcacttgcggaaactgaataacttcaactcgtatttggcgattctctcggcgctg
gactctgcaccaatcagacgcctggaatggcagaaacagacatctgagggcttggaggag
tactgcactttgattgacagttcgtcatctttccgagcgtacagagcagctctagccgaa
gtggagcctccatgtattccctacctgggtttgatcctacaggacctgacgtttgttcac
ctcggaaacccggattttattgagggtaaagtgaatttctccaagcgctggcagcagttc
aacattctggacagcatgagacgcttccagcaagtacactacgaactgaagcgtaacgaa
gacatcgtctcgttcttcaacgacttcagcgatcacctggcggaggaggcgttgtgggaa
ctctcgctcaagatcaaaccacgaaacatctcgcggcgcaggacagagcgcgaggagaag
acctag
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