KEGG   Squalius cephalus (European chub): 307174625
Entry
307174625         CDS       T11930                                 
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
  KO
K23610  WD repeat-containing protein 41
Organism
scep  Squalius cephalus (European chub)
Pathway
scep04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:scep00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    307174625 (wdr41)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:scep04131]
    307174625 (wdr41)
Membrane trafficking [BR:scep04131]
 Autophagy
  Other autophagy associated proteins
   Rab associated proteins
    307174625 (wdr41)
SSDB
Motif
Pfam: Beta-prop_WDR41 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 Beta-prop_TEP1_2nd Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd DSE1_N EIF3I Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_IP5PC_F ASA1 Beta-prop_RIG_2nd CFAP251_N Beta-prop_DCAF12 Beta-prop_SCAP WD_LRWD1 PAC11
Other DBs
NCBI-GeneID: 307174625
NCBI-ProteinID: XP_079754736
LinkDB
Position
17:7807426..7818013
AA seq 450 aa
MLRWILGGREAQGTVEKSAALFIGEEQPKNCFTEMQVLKGHFDIVRFLVQIDDLRFASAG
DDGLVLIWNVETGDCLLELRGHTQQITAMTSYTIIRGGNTHTALITASSDRTLSLWDPDS
GNRVQNISDLQSSVKCLLVLDRLDVWLSGGNELCVWNRDFELQCKTVHHSDEGISAMLEL
PKNFIAAAMDKEIVIFKLNLSGSDIVVMAMRHLSDHRDTIHSLININDGLFASGSHIGEL
IIWDSVDWTIQAYEHIVWEEPAVDSQSEVRLTQQKPIEKSIRHMSSDGEFIVAAVGSGLY
VYNVPMKSVVAYRKIAHDSNVLHTLLQKDGQLMSCSEDGSVRMWELQDLPLPAEPASSGF
FGMFGTFGRSSKQSCPPVMKLPEVPGLRSLELNGDLIGHSGAVQMFLSFKEKGLVTCSTD
HLLIVWKDGEMQSQLRSLAVFQKLEENQEL
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgctgcgatggattctggggggccgagaggcgcaggggacagtggagaagagcgcggcg
ctgttcattggggaggaacagcccaaaaactgtttcacggagatgcaggtgctgaaagga
cactttgacattgttcgatttctggtgcagattgatgacttaaggtttgcctctgccgga
gatgatggtctggtgctgatctggaatgttgagactggtgattgtttgttggagttgcgc
ggccatacgcagcagatcactgcgatgacatcatacaccatcatcagaggcggaaacaca
cacacagcgctcattacagcatcatcagaccgaacactcagtttatgggatccagattca
ggaaaccgagtgcagaatatatctgatctccagtcctctgtgaagtgtttgctggtgttg
gatcgcttggacgtctggctctcgggtggaaatgaactgtgtgtttggaacagagacttt
gagctgcagtgtaaaacggttcatcacagtgatgaaggaatctcagctatgctggagcta
ccgaagaacttcattgcagctgccatggataaagagattgtgatttttaagttgaacctg
tctggctcagacattgtggtcatggccatgcgtcatctatctgaccatcgggacaccatc
cattctctcatcaacatcaacgacggcttgttcgcgagtggctctcatatcggtgagctc
atcatctgggattcagtggattggacgatccaggcttatgagcacattgtgtgggaggag
ccagcagtagacagccaatcagaggtcagactgactcaacagaaaccgatcgagaagtcc
attcgacacatgagctcagacggagagtttatagtggcagctgtaggcagtggtctgtat
gtttataatgtgccgatgaagagcgtggtggcgtacaggaagatcgcccatgactccaat
gtcttgcacaccttgctgcagaaggacgggcagctgatgtcgtgctctgaggacggcagt
gtgaggatgtgggagttacaggacctcccccttcctgctgaacccgcctcctcagggttt
tttggcatgtttggcacttttggccggtccagtaagcagtcatgccctcctgtcatgaaa
ctcccagaagtccctggtctgcgctcgctggaactgaacggtgatctgattggtcactct
ggagctgtgcagatgttcctgagttttaaggagaagggtctggtcacctgctccacggat
cacctgctcatcgtgtggaaggatggagagatgcagtctcaactccgcagtctcgccgtc
ttccagaaactggaggaaaaccaggaactgtga

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