Squalius cephalus (European chub): 307174625
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Entry
307174625 CDS
T11930
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
KO
K23610
WD repeat-containing protein 41
Organism
scep Squalius cephalus (European chub)
Pathway
scep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
scep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
307174625 (wdr41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scep04131
]
307174625 (wdr41)
Membrane trafficking [BR:
scep04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
307174625 (wdr41)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR41
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_TEP1_2nd
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
DSE1_N
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IP5PC_F
ASA1
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_DCAF12
Beta-prop_SCAP
WD_LRWD1
PAC11
Motif
Other DBs
NCBI-GeneID:
307174625
NCBI-ProteinID:
XP_079754736
LinkDB
All DBs
Position
17:7807426..7818013
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AA seq
450 aa
AA seq
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MLRWILGGREAQGTVEKSAALFIGEEQPKNCFTEMQVLKGHFDIVRFLVQIDDLRFASAG
DDGLVLIWNVETGDCLLELRGHTQQITAMTSYTIIRGGNTHTALITASSDRTLSLWDPDS
GNRVQNISDLQSSVKCLLVLDRLDVWLSGGNELCVWNRDFELQCKTVHHSDEGISAMLEL
PKNFIAAAMDKEIVIFKLNLSGSDIVVMAMRHLSDHRDTIHSLININDGLFASGSHIGEL
IIWDSVDWTIQAYEHIVWEEPAVDSQSEVRLTQQKPIEKSIRHMSSDGEFIVAAVGSGLY
VYNVPMKSVVAYRKIAHDSNVLHTLLQKDGQLMSCSEDGSVRMWELQDLPLPAEPASSGF
FGMFGTFGRSSKQSCPPVMKLPEVPGLRSLELNGDLIGHSGAVQMFLSFKEKGLVTCSTD
HLLIVWKDGEMQSQLRSLAVFQKLEENQEL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgatggattctggggggccgagaggcgcaggggacagtggagaagagcgcggcg
ctgttcattggggaggaacagcccaaaaactgtttcacggagatgcaggtgctgaaagga
cactttgacattgttcgatttctggtgcagattgatgacttaaggtttgcctctgccgga
gatgatggtctggtgctgatctggaatgttgagactggtgattgtttgttggagttgcgc
ggccatacgcagcagatcactgcgatgacatcatacaccatcatcagaggcggaaacaca
cacacagcgctcattacagcatcatcagaccgaacactcagtttatgggatccagattca
ggaaaccgagtgcagaatatatctgatctccagtcctctgtgaagtgtttgctggtgttg
gatcgcttggacgtctggctctcgggtggaaatgaactgtgtgtttggaacagagacttt
gagctgcagtgtaaaacggttcatcacagtgatgaaggaatctcagctatgctggagcta
ccgaagaacttcattgcagctgccatggataaagagattgtgatttttaagttgaacctg
tctggctcagacattgtggtcatggccatgcgtcatctatctgaccatcgggacaccatc
cattctctcatcaacatcaacgacggcttgttcgcgagtggctctcatatcggtgagctc
atcatctgggattcagtggattggacgatccaggcttatgagcacattgtgtgggaggag
ccagcagtagacagccaatcagaggtcagactgactcaacagaaaccgatcgagaagtcc
attcgacacatgagctcagacggagagtttatagtggcagctgtaggcagtggtctgtat
gtttataatgtgccgatgaagagcgtggtggcgtacaggaagatcgcccatgactccaat
gtcttgcacaccttgctgcagaaggacgggcagctgatgtcgtgctctgaggacggcagt
gtgaggatgtgggagttacaggacctcccccttcctgctgaacccgcctcctcagggttt
tttggcatgtttggcacttttggccggtccagtaagcagtcatgccctcctgtcatgaaa
ctcccagaagtccctggtctgcgctcgctggaactgaacggtgatctgattggtcactct
ggagctgtgcagatgttcctgagttttaaggagaagggtctggtcacctgctccacggat
cacctgctcatcgtgtggaaggatggagagatgcagtctcaactccgcagtctcgccgtc
ttccagaaactggaggaaaaccaggaactgtga
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