Streptococcus parasanguinis FW213: Spaf_0114
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Entry
Spaf_0114 CDS
T02115
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
scf
Streptococcus parasanguinis FW213
Pathway
scf03030
DNA replication
scf03410
Base excision repair
scf03420
Nucleotide excision repair
scf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spaf_0114 (polA)
03410 Base excision repair
Spaf_0114 (polA)
03420 Nucleotide excision repair
Spaf_0114 (polA)
03440 Homologous recombination
Spaf_0114 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scf03032
]
Spaf_0114 (polA)
03400 DNA repair and recombination proteins [BR:
scf03400
]
Spaf_0114 (polA)
Enzymes [BR:
scf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spaf_0114 (polA)
DNA replication proteins [BR:
scf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Spaf_0114 (polA)
DNA repair and recombination proteins [BR:
scf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Spaf_0114 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spaf_0114 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AFJ25142
UniProt:
I1ZJB8
LinkDB
All DBs
Position
125487..128171
Genome browser
AA seq
894 aa
AA seq
DB search
MYQRPCDSWYNKPMEKKNKLLLIDGSSVAFRAFFALYHQIDRFKNSNGLHTNAVYGFNLM
LSHLLERIQPTHVLVAFDAGKTTFRTEMYADYKGGRAKTPDEFREQFPFIREQLDHLGIR
HYELAQYEADDIIGTLDKMAEATSVPFEVTIVSGDKDLIQLTDDNTVVEISKKGVAEFEE
FTPAYLKEKMGLTPEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLDGIYEHID
EMKASKMKENLINDKEQAYLSKTLATIDTNAPIEIGLDDITYTGPHLENLAEFYEEMGFK
QLRQALDLSGEEAAPVVIDYTEVEQVTSDMLTEDSFFHFEIFGDNYHTEPIIGFAWGTKG
QLYASTDTGLLQTPIFKEFLEKTPLKVYDFKRAKVLLSHLGITLQNPAFDSRLAKYLLST
VEDNEISTIASLYSQIALPLDEVVYGKGAKKTIPEKTALLEHLARKVAVLLDTEEPMIEQ
LQAHDQLDLLYDMEQPLAAVLAKMEIAGIKVERQTLEDMQVENEVVLERLTQEIYELAGE
EFNINSPKQLGVILFEKLELPLEYTKKTKTGYSTAVDVLGRLAPIAPIVSKILEYRQIAK
IQSTYVIGLQDWILEDGKIHTRYVQDLTQTGRLSSVDPNLQNIPVRLEQGRLIRKAFVPE
EENSVLLSSDYSQIELRVLAHISGDEHLIDAFKHGADIHTSTAMRVFNIEKPEDVTPNDR
RNAKAVNFGVVYGISDFGLSNNLGISRKEAKAYIETYFERYPGIKDYMERVVREARDKGY
VETLFKRRREIPDINSRNFNVRGFAERTAINSPIQGSAADILKIAMIHLDQALERGAYKT
KMLLQVHDEIVLQVPSDELAAIKELVKETMESAIELAVPLEADENEGKTWYEAK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgtaccagagaccttgtgattcgtggtataataagcctatggaaaaaaagaacaaatta
ctactcatcgacgggtcttccgtcgcttttcgtgcctttttcgcactctatcatcaaatc
gatcgcttcaaaaattccaatggtctgcataccaatgcggtctatggctttaatctcatg
ttgagccatctcttggagcgcatccaaccaacccatgtcctcgttgcttttgatgcagga
aagacgacctttcggacggagatgtatgccgactacaaagggggccgtgcaaaaactcca
gatgagttccgtgagcagttccctttcattcgtgagcaattagaccatctgggaatccgc
cattatgagctagcccagtatgaagcggatgatattattggaacgcttgataagatggca
gaagctacctcagtaccctttgaagtcaccattgtctctggggacaaggatttgatccag
ctgacggatgacaatacggtggttgaaatctccaaaaaaggggtggcagagtttgaagaa
ttcactccagcctatctgaaagaaaagatgggactgacaccagagcaatttatcgacctc
aaggccttgatgggagataagtcggataatatcccaggtgttactaagatcggagaaaag
accgggatcaaactactcctagagtacggctctcttgatggcatttacgagcatatcgac
gagatgaaggcttctaagatgaaggaaaacctcatcaacgacaaggagcaggcctatcta
tctaaaactctcgcaaccatcgataccaatgctcccattgaaattgggctggacgatatc
acctatacgggtcctcatctagaaaatctcgccgaattttatgaggagatgggcttcaag
caactccgtcaggccttggatctcagtggagaagaggcagctcctgtagtcattgactat
acagaagtcgagcaagtcacttcagatatgctcacggaagatagtttcttccattttgag
atttttggggacaattaccatacggaacccatcatcggtttcgcatgggggaccaaaggt
cagctctacgcgagtacagatactggtcttttacaaacaccgattttcaaagaatttctc
gaaaaaacgcccctcaaggtctatgacttcaaacgggccaaggtcttgctcagccacttg
ggcatcacccttcaaaatcccgcgtttgacagtcgattggccaagtatctcttgtcgacc
gtagaggacaatgaaatttcaaccattgcgagtctctatagtcagattgcgctaccgctc
gacgaagtcgtatatggcaagggagccaaaaaaactatcccagaaaagaccgccctatta
gagcatttggcccgaaaagttgctgttttactggataccgaagagcccatgatagagcag
ttgcaagcccatgaccagctagatttgctctatgatatggagcaaccgctagcagctgtt
ttggccaagatggaaatcgcagggatcaaggtagagcgccagaccctagaagacatgcag
gtggaaaacgaagtagtcttggagcgcttgacccaagaaatttacgagctggcgggcgaa
gagtttaacatcaattctccaaaacaattgggtgtcatcctctttgaaaaattggaactt
cctcttgaatatacgaaaaagaccaaaaccggctattcaacagccgttgatgtcttggga
cgcctagctcctatcgcaccgatcgtgtctaagattcttgaataccgccaaattgctaag
atccagtcgacctatgtcatcggtcttcaagattggattttggaagatgggaagatccat
acccgctatgtacaggatttgacgcagacgggccgtttgtccagcgtggatcccaacctg
caaaacattcctgtccgtttggaacaaggccgtctcatccgcaaggcctttgtcccagaa
gaggaaaatagtgtcttgttgagttcggactattcacagatcgaactgcgcgtcttggct
catatttcgggagatgagcatttgattgatgcctttaaacatggggcagatatccataca
tcgactgctatgcgagttttcaatattgaaaaaccagaagacgtgacgccgaacgaccgt
cgcaatgccaaagcagtaaacttcggtgtggtttatggaatttccgactttggactgtct
aacaacctagggatcagtcgaaaagaagccaaggcctacattgagacttacttcgaacgc
taccctggtatcaaggactatatggagagagtggtacgggaagcgcgtgacaaaggctat
gtagaaaccctcttcaagcgtcgtcgggagattccagatatcaattctcgcaacttcaat
gttcgaggctttgcggagcggacggctatcaactcaccaatccaaggatctgcagcagat
atcttgaaaattgccatgatccacttggaccaagcgctagaaagaggagcatacaagacc
aagatgcttcttcaggtgcacgatgaaatcgttctgcaagtaccaagtgatgaactggca
gcgatcaaagaacttgtcaaagagaccatggaatccgctattgaacttgcagtaccactg
gaagctgatgagaacgaaggcaaaacatggtatgaagccaaataa
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