Streptococcus parasanguinis FW213: Spaf_0204
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Entry
Spaf_0204 CDS
T02115
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scf
Streptococcus parasanguinis FW213
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scf03019
]
Spaf_0204
03009 Ribosome biogenesis [BR:
scf03009
]
Spaf_0204
Enzymes [BR:
scf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Spaf_0204
Messenger RNA biogenesis [BR:
scf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Spaf_0204
Ribosome biogenesis [BR:
scf03009
]
Prokaryotic type
rRNA helicases
Spaf_0204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AFJ25229
UniProt:
I1ZJK5
LinkDB
All DBs
Position
206978..208339
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AA seq
453 aa
AA seq
DB search
MKGTEKMKFTEFNFKPYIQEALKEINFREATEVQEKLIPIVLAGNDLVGESKTGSGKTHT
FLLPIFQTLNEDNDQVEAVITAPSRELATQIYQAARQIASHSEKEIRIANYVGGTDKSRQ
IEKLQVKQPHIVIGTPGRIYDLVASGDLAIHKAHTFVVDEADMTLDMGFLSTVDKIASRL
PQQLQFLVFSATIPQKLQPFLKKYLSNPVMEQIKTKTVISDTINNWLVSTKGRDKNEQIF
QLTKTLQPYLAMIFVNTKTRADDLHAYLVAQGLKVAKIHGDIPPRERKRIMNQVKNLDFE
YIVATDLAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGVAITLYQPSDDSDI
RELEKMGIRFVPKVLKNGVIEDTYDRDRRANREKKQEKLDIEMIGLVKKKKKKIKPGYKK
KIKWAVDEKRRKAKRAENRARGRAERKAKRQTF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggaactgagaaaatgaaatttacagagtttaattttaagccctatattcaagag
gcactgaaagaaatcaattttagagaagcaaccgaagtacaggaaaaactaattccgatt
gttttagctgggaatgatctggttggggaatctaagacaggatctggaaaaacccatact
ttcctcttgccgatttttcaaacgttaaatgaagacaacgatcaagttgaagcggtgatt
acggctcctagtcgggagttagcaacgcaaatttaccaagctgctcgtcaaattgctagt
cattctgaaaaagaaattcggattgccaattatgttggaggaacggataaaagtcgtcag
attgaaaaattgcaggttaaacaaccgcatatcgtgattggaactccagggcggatctat
gacctggttgcatctggtgatctggccatccataaggcccatacatttgtggtagatgaa
gcggatatgacactggatatgggatttttgtctaccgtagataagattgcttcaagactt
ccgcaacaactgcaatttttagtcttttcggctacgattccacaaaaattgcagcctttc
ttgaaaaaatatctctcaaatccagtcatggagcaaattaagaccaaaacggtgatttca
gataccatcaataattggctggtttctaccaaggggcgggataaaaatgagcaaattttc
caattgaccaagaccttgcaaccttatttagccatgattttcgtcaatacaaaaacgaga
gcagatgatcttcatgcctatttagtggctcagggtctaaaagtggcgaagattcacgga
gatatcccaccacgtgaacggaaacgaattatgaatcaggttaaaaaccttgactttgag
tatattgtggccacagatttagcagcgcgtggaattgatatcgaaggggtgagtcatgtc
attaacgatgccattcctcaagatctttctttctttgttcaccgagtcggtcggacagga
cgtaatggtctaccaggtgtagccattaccctttatcaaccgagtgatgattcagatatc
cgggaactagaaaaaatggggattcgtttcgtaccgaaagtgttgaaaaatggggttatt
gaagatacttatgatcgggacagacgggcgaatcgtgagaaaaagcaagagaaactcgac
atcgaaatgatcggtctggtgaagaagaaaaagaaaaaaatcaaaccaggctacaagaaa
aaaatcaaatgggcagttgatgaaaaacggagaaaagctaagcgagctgaaaaccgtgcg
cgtggtcgggcggaacgaaaggccaaacgccaaactttctaa
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