Streptococcus parasanguinis FW213: Spaf_0478
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Entry
Spaf_0478 CDS
T02115
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
scf
Streptococcus parasanguinis FW213
Pathway
scf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Spaf_0478 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scf03021
]
Spaf_0478 (rpoE)
03400 DNA repair and recombination proteins [BR:
scf03400
]
Spaf_0478 (rpoE)
Transcription machinery [BR:
scf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Spaf_0478 (rpoE)
DNA repair and recombination proteins [BR:
scf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Spaf_0478 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AFJ25489
UniProt:
I1ZKB5
LinkDB
All DBs
Position
496676..497260
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AA seq
194 aa
AA seq
DB search
MELEVFAGQEKSELSMIEVARAILELRGRDHEMYFSDLVNEIQNYLEKSNSEIREALPLF
YTELNVDGSFIPLGDNKWGLRSWYAIDEVDEEIIALEETDEDETPKKRKKKRVNAFMDGD
EDAIDYNDDDPEDEEVYEADPALSYDEENPDDEKSEVEAYDAEINEIVPDDLGEEVELSE
EDDEEEDAEDEEEE
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagaagtatttgctggacaagaaaaaagtgaactttctatgattgaagtggcg
cgtgcgattttagaattacgcggacgtgaccatgaaatgtactttagcgatcttgtaaat
gaaattcaaaattaccttgaaaaatcaaacagcgagatccgtgaagctcttccattgttc
tacacagaattgaatgtagatggaagctttatcccacttggagataacaaatggggcctt
cgttcatggtatgccatcgatgaagttgatgaggaaatcatcgctcttgaagaaacagac
gaagacgaaactcctaagaaacggaagaaaaaacgtgtcaatgccttcatggatggagac
gaagatgcgatcgactacaacgatgacgatccagaagacgaagaagtttacgaagcggat
ccagctctttcatatgatgaagaaaatccagatgatgaaaagagtgaagtcgaagcttac
gatgctgaaatcaatgaaatcgtaccagatgatttgggtgaggaagttgaattgagcgaa
gaagacgacgaagaagaggatgctgaagacgaggaagaagaataa
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integrated database retrieval system
