Streptococcus parasanguinis FW213: Spaf_0615
Help
Entry
Spaf_0615 CDS
T02115
Symbol
hupB
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
scf
Streptococcus parasanguinis FW213
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scf03032
]
Spaf_0615 (hupB)
03036 Chromosome and associated proteins [BR:
scf03036
]
Spaf_0615 (hupB)
03400 DNA repair and recombination proteins [BR:
scf03400
]
Spaf_0615 (hupB)
DNA replication proteins [BR:
scf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Spaf_0615 (hupB)
Chromosome and associated proteins [BR:
scf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Spaf_0615 (hupB)
DNA repair and recombination proteins [BR:
scf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Spaf_0615 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-DNA_bdg
Rpf1_C
Ribosomal_L27_C
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AFJ25623
UniProt:
I1ZKP9
LinkDB
All DBs
Position
631894..632169
Genome browser
AA seq
91 aa
AA seq
DB search
MANKQDLIAKVAEATELTKKDSAAAVDAVFAAVSEYLSKGEKVQLIGFGNFEVRERAARK
GRNPQTGKEIEIAASKVPAFKAGKALKEAVK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaaacaagatttgatcgcaaaagtggcagaagctacagaattgactaagaaa
gattcagcagcagcagttgacgctgtatttgccgcagtttcagaatacctttcaaaaggt
gaaaaagttcaattgatcggttttggtaacttcgaagttcgtgaacgtgcagctcgtaaa
ggtcgcaacccacaaactggtaaagaaattgaaatcgcagcttctaaagttccagcgttc
aaagctggtaaagctcttaaagaagcagttaaataa
DBGET
integrated database retrieval system
