Streptococcus parasanguinis FW213: Spaf_0781
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Entry
Spaf_0781 CDS
T02115
Symbol
dnaE
Name
(GenBank) DNA-polymerase III alpha-chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
scf
Streptococcus parasanguinis FW213
Pathway
scf03030
DNA replication
scf03430
Mismatch repair
scf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Spaf_0781 (dnaE)
03430 Mismatch repair
Spaf_0781 (dnaE)
03440 Homologous recombination
Spaf_0781 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scf03032
]
Spaf_0781 (dnaE)
03400 DNA repair and recombination proteins [BR:
scf03400
]
Spaf_0781 (dnaE)
Enzymes [BR:
scf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Spaf_0781 (dnaE)
DNA replication proteins [BR:
scf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Spaf_0781 (dnaE)
DNA repair and recombination proteins [BR:
scf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Spaf_0781 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFJ25784
UniProt:
I1ZL60
LinkDB
All DBs
Position
802323..805442
Genome browser
AA seq
1039 aa
AA seq
DB search
MREEKTVIAQLDTKSVYTFMESLVTIKDYVQVAKSMGYDALGIMDVDNLYGAYEFIEACQ
AHKLSPLVGLEVGLEADNETIPFRMIALSTRGYQNLMKMSTLKMMGKNNWEDVKHLTEGV
AVIVPAPFASEDLPLGLDYFIGVFADTPVQEFSHPVLPLHTVRFFEEEDVEAMQMLAAIK
DNQSLTETGPNDPTTVLKKPQDLKNDFAERFPQAITNLEKLAQGIQYDIDTQLKLPRFNP
QKLAVEELRELAQAGLLRKNLTNPVYQERLDHELDIIHQMGFDDYFLIVWDLLRFGRSQG
YYMGMGRGSAVGSLVAYALEITGIDPVEKNLLFERFLNVERYTMPDIDIDIPDIYRPEFI
RYVRDRYGSYHAAQIVTFSTFGAKQAIRDVFKRFGVPEYELTSITKRIGFRDTLTTAYEQ
NLAFRQVIHSRAEFERGFEIAKRIEGQPRQTSIHAAGVVMSDQDLTDHIPLKYGEDMFVT
QYDAHAVEANGLLKMDFLGLRNLTFVQKMKEAVYEKYQEEIVIEAIDLEDPATLALFAAG
DTKGIFQFEQAGAIRLLRRVRPNHFEEVVATTSLNRPGASDYIDNFVKRKHGQEKVDILD
PAIEEILRPTYGIMLYQEQVMQVAQRFAGFSLGKADILRRAMGKKNASEMHKMEDDFVVG
ALKLGHTEEKAKEVFAIMEKFAGYGFNRSHAYAYSALAFQMAYFKVHYPDVFFDVMLNYS
SSDYLTDALQFDFKVAPLSINTIPYRDKFQDRKIYLGMKNIKGLPRDLAYWIIDNRPFES
VEDFILRLPNQYHKLPLLTPLVELGLFDIFEKNRRKVLHNLPNLFVFADELGSLFADSNY
SWTEVEDFSQAEKYEKEEAIIGIGLSTHPLVAIGQTSPYEIQPISQLIQGEQARILIEVQ
SIRTIRTKSGDLMAFLQVSDTKKKLDVTLFPETYNRFSSLIKEGGFYYLTGKIQERDGRL
QMILAEAQLATNEKFWIQLANHKDDKMMLSILKKYPGPYPVILRYEEEKKTLQLKGYTVQ
KNKELEVELENLVMKTIYR
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
gtgagggaggagaaaacagtgattgcacagctagataccaaatcagtctatacctttatg
gaaagccttgtaaccataaaagactatgtccaagtggctaaaagcatgggttatgacgca
ttgggaatcatggatgtagataatttgtatggtgcttatgaatttatcgaagcctgtcag
gcccacaagctcagccctttggtcggtttagaagttggactagaggcagacaatgaaaca
attccgtttcggatgattgccctgtcaacgagggggtatcagaatctgatgaaaatgtcg
accctcaaaatgatggggaaaaacaattgggaggatgtgaagcaccttacagaaggagta
gcagtcattgtcccagcgccttttgccagtgaagacttgccgcttggtctagattacttc
atcggagtttttgccgatacgccggtccaagagtttagccaccctgtgctccctcttcat
actgtgcgtttttttgaggaggaagatgtggaagccatgcagatgctggcagccatcaag
gacaatcaaagcttgacggaaacagggccaaatgatcctacaacagtcctaaaaaaacct
caggatttaaagaatgatttcgcagagagatttcctcaagccatcacaaatctggaaaaa
cttgcccaaggaattcaatacgacattgatactcagttgaaattgcctcgcttcaatcct
cagaaactagctgttgaggaactgagagaattagcccaagcgggtcttcttcgaaagaac
ttgaccaatccggtctatcaagaacgtctagatcatgaattagacattattcaccaaatg
ggctttgatgattatttcttgattgtctgggaccttcttcgtttcggacggagtcaaggc
tattatatgggaatgggacgtgggtctgctgtaggctcactggtagcctatgccctagag
attacagggattgatcctgtggagaagaacctcctgttcgagcgctttttaaatgtggag
cgctacaccatgccggatattgatattgatattcctgatatttatcgtccagaatttatc
cgctatgtgagagaccgttacgggagttaccatgcagctcagatcgtgaccttttcaacc
tttggggccaaacaagccattcgagatgtctttaaacgttttggagtaccagagtacgaa
ttaacctccattaccaagcggattggctttagggatacactgacgacagcttatgaacag
aatctagcttttcgacaagtaattcatagtcgagcagaatttgaacgtggctttgaaatt
gccaaaagaatagaaggccaacctagacaaacctcgatccacgcggctggggttgtgatg
agtgaccaggatttgacagatcacattcctctcaagtacggagaagatatgtttgtcacc
cagtatgatgcccatgcggttgaagccaatggtctgttgaagatggactttttgggtctg
cgaaatttaacctttgttcagaaaatgaaggaagcagtttatgaaaagtaccaagaggag
atcgtgattgaagccattgatttagaagatccagcaaccttggccttgtttgctgctggg
gataccaagggcattttccaatttgaacaggctggagccattcgcctcttgagacgtgtg
agacccaatcatttcgaagaagtggtagcgaccacctctctcaatcgtccaggagctagt
gattacattgataatttcgtcaaaagaaagcacggccaggaaaaagttgacattctggat
ccagcgattgaagaaatcttaaggcccacttatgggatcatgctctaccaagagcaggtt
atgcaggttgcccaacgttttgcaggctttagcctggggaaagccgatattttacgtcgg
gctatgggtaaaaaaaatgcatctgaaatgcataagatggaagacgattttgttgtaggt
gctcttaaacttggtcatacggaagaaaaagctaaagaggtctttgcaatcatggaaaaa
ttcgcaggatatgggtttaaccgttcccatgcctatgcctattctgccttggcttttcag
atggcctatttcaaggtccattatccagatgttttctttgatgtcatgctcaattattca
agcagcgattatctgactgatgctctccagtttgattttaaagtcgcaccattatccatc
aataccatcccttacagagataagttccaggatcgaaaaatctacttgggaatgaaaaat
attaagggactcccgagagatttagcgtattggatcattgataatcgtccttttgaaagt
gtcgaagattttattttacgactccccaatcagtatcataaattacctttgttaacacct
ttagtggagcttggattattcgacatttttgaaaaaaatagacgcaaggtgcttcacaat
ttgccgaatttgtttgtctttgctgatgagctaggaagtttgtttgcggattctaactat
tcctggacagaagtggaagactttagccaggctgaaaaatatgagaaggaagaggccatt
attggcatcgggctcagtacccacccattggttgcgattgggcaaacgagtccctacgag
atccaaccaatttctcaactcatacaaggagagcaggcacgcattctcattgaggtgcaa
agtattcgaacgattcgaaccaagtcgggagatctcatggctttcttacaagtcagtgat
accaagaaaaaattggatgtgactctttttcctgaaacctacaatcgattttcctccttg
ataaaagaaggtggcttttattacttgacagggaagatacaagagcgtgatgggcgcttg
cagatgattctagcagaggcgcaactagcgaccaatgagaaattctggattcaactggct
aaccataaagatgataaaatgatgctttctatcttaaaaaaatatccagggccatatcct
gtaatattacgctatgaagaagagaagaaaaccttgcaattgaagggctatacagtccag
aaaaacaaagaattagaagttgaactagagaatcttgttatgaaaacgatttatcggtaa
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