Streptococcus parasanguinis FW213: Spaf_0789
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Entry
Spaf_0789 CDS
T02115
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
scf
Streptococcus parasanguinis FW213
Pathway
scf03420
Nucleotide excision repair
scf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Spaf_0789 (pcrA)
03430 Mismatch repair
Spaf_0789 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scf03400
]
Spaf_0789 (pcrA)
Enzymes [BR:
scf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Spaf_0789 (pcrA)
DNA repair and recombination proteins [BR:
scf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Spaf_0789 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Spaf_0789 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Pox_VLTF3
DUF7776
Motif
Other DBs
NCBI-ProteinID:
AFJ25792
UniProt:
I1ZL68
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All DBs
Position
812767..814983
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AA seq
738 aa
AA seq
DB search
MIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITFTNKAAREMKERAYQLNPATQDCL
IATFHSMCVRILRRDADHIGYNRNFTIVDPCEQRTLMKRILKSLNLDPKKWNERTILGTI
SNAKNDLIDEVAYAAQAGDMYTQIVAKCYEAYQKELRQSEAVDFDDLIMLTLRLFDQHPD
VLTYYQQKFQYIHVDEYQDTNHAQYQLVKLLASRFKNICVVGDADQSIYGWRGADMQNIL
DFEKDYKEAKVVLLEENYRSTKTILQAANDVIKNNRHRRPKNLWTQNEDGEEIVYYRAND
EQDEAVFVAKTIEELSREAGYKHRDFAVLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYS
RKEIRDVIAYLNLIANLSDNISFERIINEPKRGIGPGTVDKIRDFAQMQESSLLDASANI
MLSGIKGKAAQAIWDFANLILDLRERLDQLTITELVEEVLDKTGYMTALTNQGNLESQAR
IENIQEFLSVTKNFDENGETVDDESGVETLSRFLNDLALIADTDDGAQETSEVTLMTLHA
AKGLEFPVVFLIGMEENVFPLSRAAEDPEELEEERRLAYVGITRAEKVLFLTNANSRLLF
GRTSYNRPTRFINEISSDLLTYQGLARPVNTSFKASYSNGGGTTFGKGMSLSQALQERKR
QAAPSALTSSSLPFGNSNRAAVKESVAWSIGDIAIHKKWGEGTVLEVSGSGSTQELKINF
PEVGLKKLLASVAPIEKK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
ttgatcatggcgggggctggttctggtaaaacacgtgtgctgacccaccgcatcgcttac
ttaatcgatgaaaaaatggtcaatccttggaatattttggccattacctttaccaataaa
gccgctcgggaaatgaaggagcgggcttatcagttgaatccagccacccaagattgcttg
attgccaccttccactccatgtgtgtgcgcatcctccgtcgagatgcggatcatattggc
tacaatcgcaattttaccattgtcgatccatgtgagcagcggaccttgatgaagcggatc
ttgaagtccttgaatttagatccaaaaaaatggaatgaacggaccattttggggactatt
tccaatgccaaaaatgacttgatcgatgaagtggcctatgctgctcaggcgggagatatg
tatactcagatcgtcgccaagtgttatgaggcttaccaaaaagaactccgtcagtcggaa
gcagtggacttcgatgatttgatcatgctgaccttgcgtctttttgatcagcatcctgat
gtgctgacctattaccagcagaagttccaatacatccacgtggatgagtaccaagatacc
aaccatgcccaataccagttggtcaaactcttggcttcacgttttaaaaatatctgtgtc
gttggggatgcggaccagtctatttatggctggcggggagcagatatgcagaatatcctg
gactttgagaaggattataaggaagctaaggtcgtcctcctagaagagaattaccgctcg
actaagacgattttgcaagcagccaatgatgtcatcaaaaataatcgccaccgtcgtccg
aagaatctctggacacaaaatgaagacggggaagagattgtctattaccgggctaatgac
gagcaggatgaagcagtctttgttgctaaaacgattgaagagcttagtcgcgaagctggc
tacaagcaccgtgattttgctgttctctaccggaccaatgctcagtcacggaccattgaa
gaagccctactcaagtccaacattccttacaccatggtagggggcaccaagttctacagc
cgtaaggaaattcgggatgtcattgcttatctgaacttgattgccaatctcagtgacaat
atcagttttgagcgcattatcaatgaacctaagcggggaatcgggccaggtacagtggat
aagattcgcgattttgctcaaatgcaagagtcctcactcctggatgcttcagccaatatc
atgctctcaggcatcaaaggaaaggctgcccaagccatctgggactttgccaatctcatt
cttgatttgagagaaagattggaccagctgaccattacagagttggtcgaagaagtcctt
gacaagacaggttatatgacggccctaaccaatcaggggaatttggaaagtcaggcccgc
atcgagaatatccaagagttcctgtctgttactaagaattttgatgaaaatggagagacc
gtcgacgacgaatcaggtgtggaaaccttgagtcgtttcttaaacgatttggccttgatt
gccgatacagatgatggggcgcaggagacttcagaagtgaccctgatgacccttcacgcg
gccaagggattggagttcccagtcgtcttcttgattgggatggaagaaaatgtctttcct
cttagtcgtgcagcagaggatccagaagagttggaagaagagcgtcgcctagcttatgtg
gggatcacgcgggcagagaaggttctcttcttaaccaatgctaactctcgtttgctcttt
ggacggaccagctacaaccggccaacgcgttttatcaatgaaattagctcggatttattg
acctaccaaggattagcccgtccagtcaacactagctttaaggcttcttatagcaatgga
ggcggaacgacctttggaaaaggaatgagcctgtcacaagcccttcaagagcgcaagaga
caagcagctccgagtgctctcacgtcatcaagcctaccttttggcaatagcaaccgagct
gctgttaaagaaagcgtcgcttggtccattggcgacattgccattcacaagaagtggggt
gaagggactgtcctagaagtctctggtagtggtagtacccaagagctcaagatcaacttc
ccagaagtgggtctaaagaaactcttggccagtgtcgcgccaattgagaagaaataa
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