Streptococcus parasanguinis FW213: Spaf_1070
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Entry
Spaf_1070 CDS
T02115
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scf
Streptococcus parasanguinis FW213
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scf03032
]
Spaf_1070 (topA)
03400 DNA repair and recombination proteins [BR:
scf03400
]
Spaf_1070 (topA)
Enzymes [BR:
scf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Spaf_1070 (topA)
DNA replication proteins [BR:
scf03032
]
Prokaryotic type
DNA Topoisomerases
Spaf_1070 (topA)
DNA repair and recombination proteins [BR:
scf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Spaf_1070 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
phage_tail_N
HypA
Motif
Other DBs
NCBI-ProteinID:
AFJ26059
UniProt:
I1ZLY5
LinkDB
All DBs
Position
complement(1079502..1081589)
Genome browser
AA seq
695 aa
AA seq
DB search
MVTKTKRKSSTTKKNLVIVESPAKAKTIEKYLGRNYKVMASVGHIRDLKKSTMSIDFDNN
YEPEYINIRGKGPLINDLKKEAKKAKQVFLASDPDREGEAISWHLAHILNLDAKEKNRVV
FNEITKDAVKNAFKEPRQIDMDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQS
VALKLIIDRENEINDFKPEEYWTIDGVFKKGTKQFQASFYGIDGKKMKLNTNEEVKAVLE
RLDGKDFTVEKVEKKERRRNAPLPYTTSSMQMDAANKINFRTRKTMMVAQQLYEGINIGS
GVQGLITYMRTDSTRISPVAQNEAANFIVDRFGEKYSKHGSRVKNASGAQDAHEAIRPSS
VFNTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMNVRLGQNGVQYTANGSQVKF
DGYLAIYNDSDKNKMLPDMVEGDIVKQVNSKPEQHFTQPPARYSEATLIKTLEENGVGRP
STYAPTIETIQKRYYVKLVAKRFEPTELGEIVNKLIVEFFPDIVNVTFTAEMEGKLDDVE
LGKEEWQKVIDAFYKPFSKEVAKAEEEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGKFY
ACSNFPDCRHTQAIVKEIGVECPDCHQGQIIERKTKRNRIFYGCNRYPECEFTSWDKPIG
RDCPKCGHYLVEKKVRGGGKQVVCSNGDYEEEKVK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggtaacaaaaacaaaaaggaaaagtagtacaaccaagaaaaatttggtgattgtggag
tctcctgcgaaggcgaaaacaatcgaaaaataccttggtcgtaactacaaagtcatggct
agtgttggccatattcgggacctgaaaaaatctacgatgtcgattgacttcgacaataac
tatgaaccggagtatatcaatattcgcggaaaaggtcccttgatcaatgatttgaaaaaa
gaagctaaaaaagccaaacaagtctttctcgcaagtgacccggaccgagaaggagaagct
atttcttggcatttagcgcatattttgaacttggatgccaaagaaaaaaaccgtgtggtc
tttaacgaaatcaccaaggatgccgttaaaaatgcctttaaagaaccgcgccaaatcgat
atggacttggtcgatgcccaacaagcacgtcgggtcttggaccggattgtagggtattcc
atttcacctattctttggaaaaaggtcaaaaaaggactttctgcagggcgcgtgcaatct
gttgccctcaaattaatcattgatcgtgaaaatgaaattaatgattttaagcccgaagaa
tactggaccattgatggtgtcttcaaaaaagggaccaagcaattccaagccagcttctat
gggattgatggcaagaagatgaagctcaacaccaatgaagaggtgaaagctgttcttgaa
cgcttagatggcaaagattttaccgttgaaaaagtggaaaagaaagaacgtcgtcggaat
gcaccacttccatacaccacctcttccatgcagatggatgctgccaataagatcaacttc
cgtacacgcaagaccatgatggtagctcagcaattgtacgaaggaatcaatattggctct
ggtgttcaaggtttgattacctatatgcgtaccgattctacacggattagtccggttgcg
caaaatgaggcagcgaactttatcgtggatcgcttcggggagaaatattccaagcatgga
agccgtgtgaagaatgcttctggtgcccaagatgcccacgaagcaattcgtccgtctagc
gtcttcaatactcctgagagcattgccaagtacctcgacaaggaccagctcaagctctac
accttaatttggaaccgctttgtagctagtcaaatgacagcagctgtctttgataccatg
aatgtccgtttaggtcaaaatggggttcagtatacggcaaacgggagccaggtgaagttt
gatggttatttggctatttataacgactcagataagaacaagatgttgccggatatggta
gaaggtgatattgtcaagcaagtcaatagcaagccggagcaacactttacccaaccacct
gctcgatattctgaagcgactttgattaagaccttggaagagaacggtgttggtcgtcct
tcaacctatgcaccgacgattgagaccattcaaaaacgttattatgtgaagctggtagcc
aaacgctttgaaccaacagagttaggggagatcgtcaataaactgattgttgaattcttc
ccagatattgtcaacgtgaccttcacagcggagatggaagggaaactcgatgatgttgaa
cttggaaaggaagagtggcaaaaggtcattgatgccttctacaaaccattctctaaagaa
gtcgcaaaggctgaagaagagatggaaaaaatccaaatcaaagatgaaccggctggtttt
gattgtgaagtctgtggcagcccgatggtgattaaattaggacgttttggtaagttctat
gcttgtagtaatttcccagattgtcgtcatacccaggccattgtcaaagaaatcggcgtg
gagtgtcctgactgtcatcaaggtcaaatcatcgaacgtaaaaccaagcgcaaccgcatc
ttctatggatgcaatcgctatccagagtgtgaatttacctcttgggataagccgattggt
cgggattgtccaaaatgtggccactacttagttgagaaaaaagttcgtggtggtggcaaa
caagtcgtatgtagcaatggcgactacgaagaagaaaaagtgaaataa
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