Streptococcus parasanguinis FW213: Spaf_1904
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Entry
Spaf_1904 CDS
T02115
Name
(GenBank) CMP-binding-factor 1, putative
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
scf
Streptococcus parasanguinis FW213
Brite
KEGG Orthology (KO) [BR:
scf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scf03019
]
Spaf_1904
Messenger RNA biogenesis [BR:
scf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Spaf_1904
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AFJ26848
UniProt:
I1ZP74
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All DBs
Position
complement(1927448..1928410)
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AA seq
320 aa
AA seq
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MMEKMMVKINQMKKDELFEGFYLIKSAEVRQTRAGKNYLAFVFQDETGTIEGKLWDAQPH
NVESFMAGRVVHMSGRREVYNNTPQVNQLNMRLPQAGEPNNPADFKEKPPVDPKELHEYL
SNMIFKIENPVWQRIVRALYGKYEKEFYSYPAAKTNHHAFEAGLAYHTATMVRLADSIGD
IYPQLNKSLLFAGIMLHDLAKVIELTGPENTEYTVRGNLIGHIALIDEEITKVLQDLKID
DQKEEVIVLRHVILSHHGLLEYGSPVRPKIMEAEIIHMIDNLDAEMMMMTTALGLVGPGE
MTNKIFAMENRSFYKPNIDQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaagatgatggtcaaaattaaccaaatgaaaaaagatgaattgttcgaagga
ttctatttgatcaagtcagcagaagtgcgtcaaacgcgggctgggaagaactatctagcc
tttgtttttcaggatgagaccggcacgatcgaaggcaaactatgggatgcccaacctcac
aatgtagagagttttatggctgggcgcgtggtccatatgtctggacgtcgagaagtttac
aataatactccgcaagtcaatcaattgaacatgcgtttgccacaagcgggagagcctaac
aatccagcagacttcaaggaaaaaccaccagtagatcctaaagaattgcatgaatacttg
tcaaacatgattttcaaaattgaaaatccagtctggcaacggattgtccgggccctctat
gggaaatatgagaaagagttttatagttatccagctgctaagaccaaccatcatgccttt
gaagcaggtctcgcttatcatacagcgaccatggtccgcttggcagatagtatcggcgat
atctatcctcaattgaataagagtttgctctttgcagggattatgttacacgatttggct
aaagtgatcgagttgacgggtcctgaaaatacagaatacactgttcggggcaatctcatt
ggtcacattgctttgatagatgaagaaatcaccaaagtcttgcaagacttgaagattgat
gaccaaaaagaagaggtaattgtccttcgccatgtgatcttgagtcaccatggattactc
gaatacggtagtcctgttcgtccaaagatcatggaagcagagattattcatatgatcgac
aatttggatgcagaaatgatgatgatgacaacagctctaggtttggttggtcctggcgag
atgaccaacaagattttcgctatggaaaaccgatctttctataaaccgaatatcgatcag
taa
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