Streptococcus constellatus subsp. pharyngis C1050: SCI_0253
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Entry
SCI_0253 CDS
T02832
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
scg
Streptococcus constellatus subsp. pharyngis C1050
Pathway
scg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCI_0253 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scg03400
]
SCI_0253 (recD)
Enzymes [BR:
scg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SCI_0253 (recD)
DNA repair and recombination proteins [BR:
scg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCI_0253 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
HHH_5
PhoH
UvrD_C
nSTAND3
Herpes_Helicase
RsgA_GTPase
AAA_22
AAA_12
Rad17
AAA_28
5_3_exonuc
Mef1
AAA_29
NPHP3_N
SLFN-g3_helicase
AAA_25
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AGU79236
LinkDB
All DBs
Position
complement(238271..240625)
Genome browser
AA seq
784 aa
AA seq
DB search
MEFYFSGTIERIIFENPSSFFRILLLDIDDTDADFDNFEIIVTGTMADIMEGEDYTFWGN
LVQHPKYGEQLKITRYERAKPTSKGLVKYFSSDHFKGIGVKTAQKIVDLYGDNTIDKVLA
EPEKLKDIAGLSAKNREAFIMKLRQNYGTERVLAKLSEYGISNKLAFQIHDFYKEETLEI
VEHYPYQLVEDIQGIGFKIADQLAQSLGIESTAPERFRAGLLHTLLTQSMEKGDTYLEAK
ELLEHTIELLESSRQIELDPSSVADELAHLIEEDKVQNVDTKIFENSLFFAEEGICNNLL
RILEKENQNKYEPEKIEAALTHIEEEFAISYDAIQKQAICNAIQHKIFILTGGPGTGKTT
VINGIIAVYALLHGLDLHKSQDLPILLAAPTGRAARRMNELTGLPSATIHRHLGMTGDDD
TSHLDDYLDTDFIIVDEFSMVDTWLANQLLSNISSNSKLLIVGDADQLPSVSPGQVLADL
LKIPLLPQTKLEKIYRQSKDSTIVTLASQIQKGILPPDFIEKKADRSYFEARSEHIPQMI
ERIVEAAIRSGIPAQDVQVLAPMYRGQAGIDHINQLMQNLINPAETEQIIFEATDCQYRQ
GDKVIHLVNDAESNVFNGDLGYITDLLPAKYTDSKQDELTINFDGNEIVYQRSEWYKIRL
AYAMSIHKSQGSEFPVVILPITSSSHRMLQRNLIYTAITRAKSKLILLGEKSAFAFAVQN
TGTTRKTYLKERFEDFLNVEKVIHTSVDNLETTVGNYVLTEENFLKINPMIGITDEDIQN
IFGE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggaattttacttttcaggcaccattgaacgcattatttttgaaaatcccagcagtttc
tttcggattctgctgttagatattgacgacaccgatgccgattttgataattttgagatt
attgtcacaggcaccatggcggatattatggagggcgaagactacactttttggggaaat
ctcgtgcaacaccctaaatatggagaacagcttaaaataacacgctatgagcgtgcaaag
ccaaccagcaaaggcttagtcaaatatttttcaagcgaccattttaaagggattggtgta
aaaacagcacaaaaaatcgtggacctctatggcgataacacgattgataaggtcttagca
gagccagaaaaattaaaggatattgcagggctttctgccaaaaatcgcgaagcttttatt
atgaaactaagacagaactacggtaccgagcgagtccttgcaaagctatctgaatacggc
atttcaaataagcttgcctttcagattcacgatttttacaaagaagagactctcgaaatt
gtcgaacactatccttaccaattggtagaagatattcaaggaataggatttaaaattgcc
gaccaactggcacaaagcttaggaattgaaagtactgctccagagcgttttcgtgctggg
ctgcttcacacactcctaacccagtctatggaaaagggtgacacttatcttgaagccaaa
gaacttctggaacatacgattgaactcctcgaaagttcccgtcagattgagttagaccca
agttctgttgcggatgagctggcacatttgattgaagaagataaagttcaaaatgtcgat
acgaagatttttgaaaacagtctcttttttgctgaagagggaatctgcaacaatctctta
cgcattctggagaaggaaaatcaaaataaatatgaaccggaaaaaatcgaagctgctctt
actcacattgaggaagaatttgctatttcctatgatgctatccagaaacaagccatttgc
aatgctatccagcacaaaattttcatcttaacaggtggtcctggaactggaaaaacgacc
gttatcaatggaattattgctgtctacgctctgctacatggtctggatttacacaaatct
caagatttacctatccttttagcagctccgactgggcgtgctgccagacgcatgaatgaa
ttaacagggcttccaagcgcaacgattcatcggcatttaggcatgacaggagacgatgac
actagccatttagatgattatttggacacagactttattattgtcgacgaattttcaatg
gtagatacttggttagccaatcaactcctcagcaatatctcttccaacagcaaacttctc
attgtcggagatgctgatcagctgccttctgtcagccccggacaagtgctggcagattta
ctgaaaatccctcttcttccgcagaccaaattagaaaaaatttatcgacaaagcaaagac
tccactatcgtcaccttagccagtcagattcaaaaaggcattctgccacctgattttata
gaaaaaaaggctgaccgttcttattttgaagcgcgtagtgaacatattccgcagatgatt
gaacgtattgtagaagctgctatccgcagtggcattccagctcaagatgtgcaggtgctt
gcgcctatgtaccgcggacaggctgggattgaccacatcaatcaactcatgcaaaatcta
atcaaccctgccgaaacagaacaaatcatttttgaagcaactgattgtcaatatcgacaa
ggcgacaaggtcattcatctggtcaatgatgcggaaagcaatgtgtttaatggtgattta
ggctatatcaccgatttgctaccagcaaaatatacggactctaagcaggacgaactgact
atcaatttcgacggcaatgagattgtttatcaacgcagtgaatggtacaagattcgtctg
gcatacgctatgagtatccacaaatctcagggcagtgaatttccagtcgtcattttaccg
attacgtccagcagccaccgcatgctgcaacgcaatcttatctatactgctatcacccgc
gccaagagcaaattgattcttcttggggaaaagtctgcctttgcttttgctgtccaaaat
actgggacaacacgtaaaacctacctgaaagagcgctttgaagactttctcaatgtagaa
aaagttatacacacttctgtggataatttggaaacaactgtgggaaactatgtcttgact
gaggaaaatttcttgaaaatcaatcccatgattggaataacggatgaagatattcagaac
atttttggagaataa
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