Streptococcus constellatus subsp. pharyngis C1050: SCI_0410
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Entry
SCI_0410 CDS
T02832
Name
(GenBank) ATP-dependent RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
scg
Streptococcus constellatus subsp. pharyngis C1050
Brite
KEGG Orthology (KO) [BR:
scg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scg03019
]
SCI_0410
03009 Ribosome biogenesis [BR:
scg03009
]
SCI_0410
Enzymes [BR:
scg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCI_0410
Messenger RNA biogenesis [BR:
scg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCI_0410
Ribosome biogenesis [BR:
scg03009
]
Prokaryotic type
rRNA helicases
SCI_0410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
NAT10_TcmA_helicase
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGU79376
LinkDB
All DBs
Position
397962..399305
Genome browser
AA seq
447 aa
AA seq
DB search
MKFTEFKFKDYIQEVLKDLNFVEATEVQEKLIPVVLAGRDLVGESKTGSGKTHTFLLPIF
QKLNEDADSVQVVITAPSRELARQIYQAARQIAAFSDKEIRVANYVGGTDKNRQIGKLAF
SQPHIVIGTPGRIYDLVKSGDLAIHKANTFVVDEADMTLDMGFLETVDKIASSLPKELQF
LVFSATIPQKLQPFLKKYLSNPVIEQIKTKTVISDTIENWLISTKGQDKNAQIYQITQLL
QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDVPPRERKRIMNQVKNLEFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFIHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL
GIQFIPKMIKADEFQDTYDRDRRSNREKRQEKLDTEMIGLVKKKKKKIKPGYKKKIQWAV
NEKRRKTKRAENRARGRAERKAKRQSF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacagaatttaagtttaaagattatatccaagaggtactcaaggatttgaac
tttgttgaggcgacagaagtccaggaaaaactcattccggttgtgcttgctggtcgtgac
ttggtgggagagtccaaaacaggttcagggaaaacccatactttcttgctgccgattttt
caaaagctgaatgaagatgcagatagtgttcaggttgtcattactgctcctagtcgtgag
ttggctaggcagatttatcaggctgcacgccaaattgctgctttttctgataaggaaatt
cgagttgctaactatgtcggtggaactgataaaaatcgtcagattgggaaattggctttc
agtcagccgcatatcgttattggaacaccgggacgtatctatgatttggtgaaatcaggt
gatttggctattcataaggcgaatacctttgtagtagatgaagcagatatgaccttggat
atgggctttttagaaacagtggataagattgcgtccagtttgccaaaagaattgcaattt
ttagtcttttcagcaacgattccacaaaaattacagccatttttaaaaaaatatctatca
aaccctgttatagagcagatcaaaaccaaaacagtcatctctgatacgattgaaaactgg
ctgatttcgactaaaggtcaggataaaaatgcgcaaatttaccaaatcactcagcttttg
cagccttatctagccatgatttttgttaatactaaaacacgagctgatgagctgcacagt
tatttgacagcgcaaggacttaaggtcgctaaaattcacggagacgttcctccgcgagag
cgcaaacggattatgaatcaagtgaaaaatctggaatttgaatatattgtggcgaccgat
ctagcagcaagagggattgatattgaaggggtcagtcatgttatcaatgatgcaattccg
caagatttgtctttctttatccaccgagttggtcggacaggacgaaatgggctgccaggc
actgccattaccctatatcagccaagtgatgattcagatattcgcgagttagagaaattg
ggaattcagttcattcctaagatgataaaagctgatgagtttcaggatacttatgaccga
gatcgtcgttctaatcgtgaaaaacgccaagaaaaattggatacagagatgattggtttg
gttaaaaagaagaagaaaaaaatcaaaccgggctataaaaagaaaattcaatgggctgtc
aatgaaaaacgccgaaaaaccaagcgtgctgaaaatcgagcacgcggtcgtgcagaaaga
aaagcgaaacgtcagagcttttag
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