Streptococcus constellatus subsp. pharyngis C1050: SCI_0428
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Entry
SCI_0428 CDS
T02832
Name
(GenBank) hypothetical protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
scg
Streptococcus constellatus subsp. pharyngis C1050
Pathway
scg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCI_0428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scg03019
]
SCI_0428
Messenger RNA biogenesis [BR:
scg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCI_0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AGU79394
LinkDB
All DBs
Position
417894..419501
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AA seq
535 aa
AA seq
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MEMIFAGVFAVIIGLVIGYVSISARMKSAKEAAELTLLNAEQEATNLRGQAEREADLLLK
EVKRESKSLKKEALLEAKEEARKYREEVEEEFKSDRQELKQLESRLTERATSLDRKDDNL
TNKERTLDQKEQSISDRTKNLEARENKLTELEQHKEAELERVAALSQTEARDIILTQTED
KLSKEIATRIREAEQDVKERSDKIAKDILVQAMQRIAGDYVAEQTNSTVHLPDDTMKGRI
IGREGRNIRTFESLTGIDVIIDDTPEVVTLSGFDPIRREIARMTMEGLLKDGRIHPARIE
ELVEKNRLEIDHKIREYGEAAAYEIGAPNLHPDLMKIMGRLQFRTSYGQNVLRHSVEVAK
LSGVIASELGENAALARRAGFLHDIGKAIDREVEGSHVEIGTELARKYKEHPIVVNTIAS
HHGDVEAESVIAVIVAAADALSAARPGARSESLESYIKRLQDLEEIANSFEGVKNSFALQ
AGREIRIMVNPGQIKDDKVTILAHDVREKIENNLEYPGNIKVTVIRELRAVDYAK
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgatttttgcaggtgtttttgccgtcatcattggtttagtcattgggtatgta
agtatctcagctcgcatgaaatcagcgaaagaagctgcggaacttactcttttaaatgct
gaacaagaagcaactaatttacgtggacaagctgagcgtgaagcggatttgttattaaaa
gaagtcaagcgcgaaagtaaatcccttaaaaaagaagcactgttagaggcaaaagaagaa
gccagaaaatatcgagaagaagttgaggaagaatttaaatctgatcgtcaagaattgaag
caacttgaaagtcgtttgacagaacgtgcgacaagtcttgatcgtaaagatgacaatttg
accaacaaagaaagaacgctcgatcagaaagaacaaagtatttctgacagaacaaaaaac
cttgaggcgcgtgaaaacaaactgacagagttggagcaacacaaagaagcagaattagaa
cgtgttgccgcactctcacaaacagaagcccgagatattattctcactcagactgaagat
aagttatcgaaggaaattgcgacacggattcgtgaagcagagcaagatgtcaaagaacgt
tctgataaaatagcgaaggatattttagtccaagccatgcaacgaattgcaggtgactac
gttgctgagcaaaccaattcaactgttcatctgccagatgatacgatgaaggggcggatt
attggacgtgaaggtcggaatattcggacctttgaaagtttgacgggtattgatgtcatt
attgatgatacaccagaagtggtgaccctatctggattcgatccaattcgtcgtgagatt
gctcgtatgacaatggaaggactattgaaagatggtcgcatccatccagctcgtattgaa
gaattggtagagaagaatcgtctggaaattgatcataagattcgtgagtatggcgaagca
gcggcttatgaaatcggtgcaccaaatttgcatcccgatttaatgaagattatgggacgc
ttgcagttccgtacatcctacggtcaaaatgtactgcgccattctgttgaagtcgcgaaa
ttatctggtgtcattgcaagtgaacttggtgaaaatgctgccttagctcgccgtgctggt
ttccttcacgacattggaaaagctattgaccgtgaagtggaaggtagccacgtggaaatt
ggaacagaattggctcgtaagtataaggaacatccaattgtggttaacacgattgccagt
caccatggtgatgtagaagcagaaagtgtcattgctgttatcgtagctgcagcagacgct
ctcagtgccgctcgaccaggcgcacgcagtgaatctctggaaagctatatcaaacgtctc
caagatttggaagaaattgccaatagctttgaaggcgtgaaaaatagttttgccttacaa
gcaggtcgtgaaatccgaattatggttaatcctggtcaaatcaaggatgataaggtcacg
attctcgctcatgatgtgcgtgaaaagattgaaaacaatctggaatatccaggtaatatc
aaagttaccgttattcgtgaactgcgcgctgtggattacgcaaaatag
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