Streptococcus constellatus subsp. pharyngis C1050: SCI_0945
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Entry
SCI_0945 CDS
T02832
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
scg
Streptococcus constellatus subsp. pharyngis C1050
Brite
KEGG Orthology (KO) [BR:
scg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scg03032
]
SCI_0945 (topA)
03400 DNA repair and recombination proteins [BR:
scg03400
]
SCI_0945 (topA)
Enzymes [BR:
scg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SCI_0945 (topA)
DNA replication proteins [BR:
scg03032
]
Prokaryotic type
DNA Topoisomerases
SCI_0945 (topA)
DNA repair and recombination proteins [BR:
scg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCI_0945 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
HypA
Motif
Other DBs
NCBI-ProteinID:
AGU79888
LinkDB
All DBs
Position
complement(968898..970982)
Genome browser
AA seq
694 aa
AA seq
DB search
MATKTKKKITAKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSTMSVDFENNY
EPEYINIRGKGPLINDLKKEAKKAKQVYLASDPDREGEAISWHLAHILNLDETDKNRVVF
NEITKDAVKNAFKEPRQIDMDLVDAQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSV
ALKLIIDRENEINAFKPEEYWTIDGTFKKGARQFQASFYGINGKKMKLAINDDVKNVLSQ
IKNDEFTVESVEKKERKRHAPLPYTTSSMQQDAANKINFRTRKTMMVAQQLYEGINIGSG
VQGLITYMRTDSTRISPVAQNEAATFITDRFGEKYSKHGSRVRNTSGAQDAHEAIRPSSV
FNTPDNIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMSVKLEQNGVQFAANGSQVKFD
GYLAIYNDSDKNKMLPDMKKGDLVKCINTNPEQHFTQPPARFSEATLIKTLEENGVGRPS
TYAPTIETIQKRYYVKLVSKRFEPTELGEIVNSLIVEFFPDIVNVKFTADMEAKLDDVEV
GKEQWKKVIDEFYKPFEKEVSKAETEMEKIQIKDEPAGFDCEVCGSPMVIKLGRYGKFYA
CSNFPDCRHTQAIVKEIGVECPKCHQGQIIERKTKRNRLFYGCNRYPDCDFTSWDKPVGR
SCPKCGQYLVEKKVRGGGKQVVCSNGDYEEEKVK
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacaaaaacaaagaaaaaaataacagctaaaaaaaatctggtgattgtagagtcg
ccagctaaggcaaaaacaattgaaaaatatttaggacggaactacaaggttttagccagc
gtaggtcatattcgagatttaaaaaaatctacgatgtccgttgattttgaaaacaactat
gagccagaatatatcaatattcgcgggaaagggcctcttatcaatgatttgaaaaaagaa
gctaaaaaagcgaaacaagtctatcttgcaagtgacccggaccgtgaaggagaagctatt
tcttggcatttggctcatatcttaaatctggacgagacagataaaaatcgtgttgttttc
aacgaaatcacgaaagatgcagtaaaaaatgcttttaaagaaccacgtcaaattgatatg
gatttggtagatgctcaacaagctcgtcgtgtacttgaccgtattgtggggtattctatc
tctccaattctctggaaaaaggtcaaaaaaggattatctgctggacgtgtgcaatctgtt
gctttgaagctcatcattgatcgtgaaaacgaaattaatgcttttaagccagaagaatat
tggacgattgatggaacgttcaagaaaggtgctcggcaatttcaagcaagcttttatggt
ataaatggcaagaaaatgaaacttgctatcaacgatgatgtcaaaaatgttctttctcaa
atcaagaatgatgaatttaccgtggaaagtgttgagaaaaaggaacgcaagcgtcatgct
ccgctaccttatactacatcatctatgcagcaagacgctgctaataaaatcaatttccga
actcgcaaaactatgatggtcgctcaacaactctacgaaggaatcaatatcggttctggt
gtgcaaggtttgattacctacatgcgtacagattctactcgtattagcccagtagctcaa
aacgaagctgcaactttcattacagatcgttttggcgaaaaatattctaaacatggcagt
agagtccgaaatacttctggcgcacaagatgctcatgaagcgattcgtccgtcaagtgta
tttaatacacctgacaatatcgcaaaatatctagataaagatcaattgaaattgtatacg
ttgatttggaatcgtttcgtggcgagtcaaatgactgctgcggtatttgacacgatgagt
gtgaagttagagcaaaatggtgttcaatttgctgcaaatggtagtcaggttaaatttgat
ggttatctagctatttataacgactctgataaaaacaaaatgctgccagacatgaaaaaa
ggtgatttggttaagtgtatcaacactaatcctgagcagcattttactcaaccaccagca
cgtttttcagaagcaactttaattaagaccttggaggagaatggcgttgggcgtccatca
acttatgcaccaacaattgaaactattcaaaaacgctactatgtaaaattagtttccaaa
cgctttgaaccaaccgaattgggagaaattgtgaattcattgattgttgaattcttccca
gatattgtcaatgtgaagtttaccgctgatatggaagccaaattggatgatgtagaagtc
ggaaaagagcagtggaaaaaggtcattgacgaattttataaaccatttgaaaaagaagtt
tctaaagcagaaactgaaatggagaaaattcaaattaaagacgaaccggctggttttgat
tgtgaagtttgtggaagtcctatggttatcaagttaggacgttatggtaaattctatgct
tgtagcaacttccccgattgtcgtcacacccaagcaattgtcaaagaaataggcgtagag
tgtcctaaatgtcatcaaggacaaatcattgagcgcaaaaccaagcgcaatcggcttttt
tatggttgcaatcgctatccagattgtgacttcacctcttgggataaaccggttggtcgc
tcttgtccgaaatgcggtcagtatcttgtagaaaagaaagttcgcggtggtggcaaacaa
gttgtctgcagcaacggggattacgaagaagaaaaagtaaaataa
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