Streptococcus constellatus subsp. pharyngis C1050: SCI_1419
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Entry
SCI_1419 CDS
T02832
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
scg
Streptococcus constellatus subsp. pharyngis C1050
Pathway
scg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SCI_1419 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scg03019
]
SCI_1419 (deaD)
03009 Ribosome biogenesis [BR:
scg03009
]
SCI_1419 (deaD)
Enzymes [BR:
scg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SCI_1419 (deaD)
Messenger RNA biogenesis [BR:
scg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SCI_1419 (deaD)
Ribosome biogenesis [BR:
scg03009
]
Prokaryotic type
rRNA helicases
SCI_1419 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AGU80342
LinkDB
All DBs
Position
complement(1470691..1472235)
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AA seq
514 aa
AA seq
DB search
MKFNELHLSAELLAEIDKAGFVEASPIQEQTIPLAMAGKDVIGQAQTGTGKTAAFGFPTL
EKIDTEDPTVQALIIAPTRELAVQSQEELFRFGRSKGVKVRSVYGGSSIEKQIKALKSGA
HIVVGTPGRLLDLIKRKALKLNHVETLILDEADEMLNMGFLEDIEAIISRVPEDRQTLLF
SATMPDAIKQIGVKFMKEPEHVKIAAKELTTELVDQYYIRVKENEKFDTMTRLMDVEQPE
LSIVFGRTKRRVDELTRGLKIRGFRAEGIHGDLDQGKRLRVLRDFKNGNLDVLVATDVAA
RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGKSGQSITFVAPNEMGYLQIIESLTKK
RMKGMKPATAEEAFQAKKKVALKKIERDFADETIRSNFEKFGKDARKLAAEFTPEELALY
ILSLTVQDPDTLPEVEIAREKPLPFKYVSGANKGNRNNKGGNRRERGSRRGNYKKGGRNE
YFDKEKRYRKEHKKPRNTSSEKKTGFVIRNKGDK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttaatgaattacatttgtctgctgaattgttagcagaaattgacaaagctggt
tttgtagaagctagcccgattcaagaacagaccattccgctggctatggcaggaaaagac
gtcattggacaagcccagactggtactggaaaaacagctgcgtttggttttccgactctg
gaaaagattgatacagaggatccaactgttcaggcactgattattgcaccgactcgtgaa
ttagcagtacagagtcaagaagaactctttagatttggtcgtagtaagggtgtcaaagtc
cgctcagtttatggcgggtctagtattgaaaagcaaattaaagctttgaaatcaggtgct
cacattgtcgtaggaaccccagggcgtttattagacctcattaagcgtaaggcgttgaaa
ctcaatcatgtagaaacgcttattttagatgaagcagacgaaatgctcaatatgggtttc
ttagaagacattgaagccattatttcccgtgtgccagaagaccgtcagacccttctcttt
tcagcaaccatgccggatgctatcaagcagattggtgtgaagtttatgaaagagcctgag
catgtcaagattgctgctaaagagctgactactgagctggtagaccagtactatatccgc
gtcaaggaaaatgaaaaatttgataccatgacacgtcttatggatgtagagcagccagaa
ctttctattgtttttgggcgtaccaaacgccgagtagatgaattgactcgtggtctcaag
attcgtggtttccgagcagaagggattcatggcgatttagaccaaggaaaacgcctccgt
gtacttcgtgatttcaagaatggcaatctagacgttcttgttgcaacagatgtagctgca
cgtggattggatatttctggtgtgacccatgtctacaactacgacattcctcaggatcca
gaaagctatgttcaccggattggtcggactggtcgtgctggtaagtcaggtcagtctatc
actttcgtagctccaaatgaaatgggttatcttcaaattatcgaaagcttaactaagaaa
cgcatgaaaggcatgaagccagcaactgcagaagaagcctttcaagctaagaaaaaagtt
gccctcaaaaagattgagcgagattttgcagatgagaccattcgtagcaattttgagaaa
tttggtaaagatgctcgtaagctagcagctgaatttacgccagaagagttagccttatat
atcttgagcctaacggtgcaagatccagatactcttccagaagtggaaattgcgcgtgag
aaaccactaccgtttaaatatgtttctggtgccaataaggggaatcggaataataaaggt
ggaaatcgtcgtgaacgtggtagcagacgtggcaattacaaaaagggcggtcgcaatgag
tattttgacaaagaaaaacgctatcgcaaagagcacaagaaaccacgcaatacttcaagt
gagaagaaaacaggttttgtgattcggaataaaggtgataaataa
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