Sphingobium chlorophenolicum: Sphch_0074
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Entry
Sphch_0074 CDS
T01522
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sphch_0074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_0074
Enzymes [BR:
sch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sphch_0074
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sphch_0074
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
PriA_3primeBD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
AEG47777
UniProt:
F6ETE0
LinkDB
All DBs
Position
1:complement(85348..87534)
Genome browser
AA seq
728 aa
AA seq
DB search
MSSRARVILLNAALGPLDYRVPHGMSVQPGSIVVAPLGPRQIVGVVWEEDSFPDVETVGD
NRLRNIVGPVDAPPVPETLRRLIEWTADYYLAPIAAVLRMTLASMAALEGARTVIEYRAT
GDLPGQEFQGRMTEQRAQAMERIGERQGLIRELAMIGGVSDAVIRGLVKAGAFEAVEVSV
DTPFPMPDPDHAPPLLSDRQGAAADRFIAAVRGRDFAPFLLDGVTGSGKTEVYFEAIAAA
IREGRQVLVLLPEIALTEPFLERFEKRFGTVPVNWHSGLRQTERRRAWRAIAAGEAPVVV
GARSALFLPYPNLGLIVVDEAHEASFKQEDGVHYHARDVAVMRGLIEKFPVILASATPAI
ETRHQVELGRYREIKLPSRFGGATMPAVEQVNLLTDPPERGRWIAPPLVKAIDETMAKGE
QSLLFLNRRGYAPLTLCRHCGYRFQCPNCTAWMVEHRLTHRLACHHCGHVVPAPRFCPEC
KEEDSLVACGPGVERIADEVKALWPQARTAIVTSDTLWSPAKVAEFVKSVEAGAVDIIIG
TQLVTKGYHFPNLTLVGVIDADLGLEGGDLRASERTFQQIVQVAGRAGRGQKPGRVFIQT
RMPEAEVIKALIAGDSERFYEVETENRRRANAPPFGRFAAIIVSSEDADEAAEVARLIGK
SAPLIEGMRVYGPAPAPLSVLRGRHRHRLLIHAARQVDVQGAIREWLGNLTWKSGTRVAV
DVDPYSFM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgcgcgcccgtgtcatcctgttgaacgccgctttggggccgctcgattatcgg
gtgccgcatgggatgagcgtgcagcccggcagcatcgtcgtcgcgccgctggggccgcgc
cagatcgtcggcgtggtgtgggaggaggacagcttccccgatgtcgagacggtgggcgac
aacaggctgcgcaatatcgtggggccggtcgacgcgccgcccgtgcccgaaacgctgcgg
cggctgatcgagtggacggcggattattatctggcgcccatcgccgccgtgctgcgcatg
acgctggcgtcgatggcggcgctggagggggcgcggacggtcatcgaatatcgcgcgacc
ggcgacctgcccggccaagaatttcaagggcgcatgaccgagcagcgggcgcaggcgatg
gagcgcatcggcgagcggcaggggctgatccgcgaactggcgatgatcggcggggtcagc
gacgcggtcatccgcgggctggtgaaggcgggcgcgttcgaagcggtggaggtaagcgtc
gacacgcccttccccatgcccgacccggatcatgcccctcccctgctgtccgacaggcag
ggcgcggcagccgaccggttcatcgcggcggtcaggggccgggatttcgcgcccttcctg
ctcgacggggtgacggggtcgggcaagacggaggtctatttcgaggctatcgccgccgcc
atccgcgaggggcggcaggtgctggtgctgctgcccgaaatcgcgttgaccgaaccgttt
ctggagcggttcgagaagcgcttcggcacggtgccggtcaactggcacagcggcctgcgg
cagaccgagcggcggcgggcctggcgggccatcgcggcgggggaagcgccggtggtggtc
ggggcgcgctcggcgctgttcctgccctatcccaatctggggctgatcgtggtcgatgaa
gcgcatgaggccagcttcaagcaggaggatggggtccattatcacgcccgcgacgtggcg
gtgatgcgcggcctcattgagaaattccccgtcatcctcgcctccgccacgcccgccata
gagacgcggcatcaggtggaactgggccgctatcgggagatcaagctgccctcccgcttc
ggcggggccaccatgcccgccgtcgagcaggtcaacctgctgaccgatccgccggagcgg
gggcgctggatcgcgccgccgctggtcaaggcgatcgacgagaccatggcgaagggcgag
cagagcctgctcttcctcaaccgccggggctatgcgccgctgactttgtgccgccattgc
ggctatcgtttccaatgccccaattgcaccgcctggatggtcgagcatcggctgacccat
cgccttgcctgccatcattgcggccatgtcgtccccgcgccccgcttctgcccggaatgc
aaggaggaggattcgctggtcgcctgcggccccggcgtggaacggatcgcggacgaggtg
aaggcgctctggccgcaggcgcgcaccgccatcgtcacgtccgacacgctctggtcgccc
gccaaggtcgcggaattcgtgaagtcggtggaggcgggcgcggtcgacatcatcatcggc
acgcaactggtcaccaagggctatcatttccccaacctgacgctggtgggcgtgatcgac
gccgatctggggctggagggcggcgacctgcgcgcgtcggagcggaccttccagcagatc
gtgcaggtggcggggcgcgccgggcgggggcagaagccgggccgcgtcttcatccagacc
cgcatgccggaggcggaggtgatcaaggcgctgatcgcaggcgattcggagcgtttctac
gaagtggagacggagaatcgccgccgcgccaacgccccgcccttcggccgcttcgccgcg
atcatcgtgtccagcgaggatgccgacgaagccgccgaggtagcccggctgatcggcaag
tccgccccgctgatcgaggggatgcgcgtctatggccctgccccggcgccgctgtccgtg
ctgcgcgggcggcatcgccatcgcctgctgatccacgccgcccggcaggtcgacgtgcag
ggagccattcgcgaatggctgggcaatcttacctggaagtccggcacgcgggtcgcggtg
gatgtcgacccctacagcttcatgtga
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