Sphingobium chlorophenolicum: Sphch_0091
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Entry
Sphch_0091 CDS
T01522
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_0091
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Sphch_0091
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
AAA_16
DnaB_C
AAA_22
RecA_N
nSTAND_NTPase5
AAA
AAA_30
NACHT
Glyco_hydro2_C5
nSTAND3
NTPase_1
PAXNEB
AAA_5
MeaB
Rad51
SLFN-g3_helicase
AAA_29
AAA_24
AAA_14
NPHP3_N
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEG47793
UniProt:
F6ETY6
LinkDB
All DBs
Position
1:101285..102652
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AA seq
455 aa
AA seq
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MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEEAAETIFSARHDLHSGGRALTLVGL
DDKVELPPRTSTGIAEFDRALGGGIVSGSATLIGGDPGIGKSTLLLQAAARIASAGHSVA
YISGEEAADQVRLRAQRLGLGNAPVRLASATSVRDILTTLGEGAPPALLIIDSIQTMHSD
LIEGAPGTVSQVRASSQELIRFAKQRGTALILVGHVTKDGSIAGPRVLEHMVDTVLSFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMVAEGLEEVANPSALFLTHRDENVTGATVFPALE
GTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMVLAVLEARCGLSFSTCEVYLNVAG
GYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSGEIRPVAHAPLRLREAAKLGF
NRAFVPAAAADGVKGISVSGYRALAQLVDQMLGRG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagcaaagcgcaaattcgtctgtcagcaatgcggcaccgtttccggccggtgg
caggggcaatgcgacgattgcggcgaatggaacagcattgtcgaggaagcggcggagacg
atcttctccgcgcgccatgatctgcatagcggggggcgcgccctgacgctggtgggcctg
gacgacaaggtcgagctgccgccacgcaccagtacgggcatcgcggaattcgaccgggcg
ctggggggtggaatcgtctccggatcggcgaccctgatcggcggcgatccgggcatcggc
aagtcgacgctgctgttgcaggcggccgcccgcatcgcttcggccgggcacagcgtcgcc
tatatcagcggggaggaggcggcggatcaggtccggctgcgcgcccagcgtctgggcctg
ggcaatgcgccggtgcgactggccagcgccacttccgtgcgcgatattttgacgacgctg
ggggagggtgcgccgcctgccctgctgatcatcgattcgatccagacgatgcacagcgac
ctgatcgagggcgcgccgggcacggtcagccaggtgcgcgcttcgtcgcaggaactgatc
cgcttcgccaagcagcgcggcacggcgctgatcctggtcggccatgtgaccaaggacggc
agcatcgccggtccccgggtgctggagcatatggtcgacacggtgctgagcttcgagggc
gagcgcagccaccaatatcgcatcctgcgcgccatcaagaaccgtttcggcggcacggac
gagatcggcgtcttcgccatggtggcggaggggctggaggaggtcgccaacccgtccgcg
ttgttcctcacccatcgtgacgagaatgtgacgggcgcgaccgttttccccgcgctggag
ggtacgcgcccggtgctggtcgaaattcaggcgttggtggtgcggctttccagcggcgcg
accccgcgccgcgccgtggtggggtgggacagtggaaggctggccatggtgctggccgtg
ctggaggcgcgatgcggcctcagcttctcgacctgcgaagtctatctgaacgtcgcgggc
ggttatcgcctgtcggaccccgccgccgaccttgccgtcgccgccgcgctgatgtccgct
ctctccgaacgcccggtgcccgccgatgtcgtcctgttcggcgaaatcgcgttgtcgggg
gaaatccgccccgtggcgcatgccccgctgcggttgcgggaagcggccaagctgggcttc
aaccgcgccttcgtccccgccgccgcggcggatggggtgaagggcatttcggtcagcggc
tatcgcgcgctcgcgcaacttgttgaccagatgcttgggcgcggatag
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