Sphingobium chlorophenolicum: Sphch_0253
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Entry
Sphch_0253 CDS
T01522
Name
(GenBank) protein of unknown function DUF490
KO
K09800
translocation and assembly module TamB
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sch02000
]
Sphch_0253
Transporters [BR:
sch02000
]
Other transporters
Pores ion channels [TC:
1
]
Sphch_0253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AEG47953
UniProt:
F6EV29
LinkDB
All DBs
Position
1:257993..262168
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AA seq
1391 aa
AA seq
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MAEELPATPPRRRRAWDSRWQRWVAGIIAALLLIVAGALAWLDTAPGHRFLVARIARISP
PSGLRIHVDRIEGSIYRKAILHGLTLSDPKGAFFDAPRVELDWWPFAWAYNRLDIDRLVI
PQATLRKLPKLNPSERQGPILPGFDIRLMQFSVGRLTIDRGVNGKVQEATLSGDADIRGG
RAIIDLSARVLNGEDALNIALDSRPDDDRFDLDVTVNAPKGGVLAVMAGLRQDANLRIQG
KGSWTRWDGRLAGTLDSEPAIDLKLAARSGAYTATGTIEGSAIAGQGLFQRLSAPRLAIQ
ASGSMTDRVIDGKLSLRSAAIDLSADGGIDLRNNALDNLLVDVKLARPQALLKSMNGRDI
AARVRLDGPLGAFGYEYLLTAKQLVFGKTVIHDVRADGKGRKAKGGPALIPVHLRARRLD
GQGELVEGIIRNFVLDGVLQLRNQQIVSNPMTVRSDKLRGKLIMVADLKTGRYDFGLDGQ
INGLAIRGLGIVDLTSKLRAIPGPRGAFTLSGNAMARMRRLDNSFLRSLGGGLPVLRSGL
TLGPDGQLQFTNLHLQAPLITLAAKGYRRRDGSFHFEGGGQHKSYGPLRLTLDGKIDRPT
VDLVLQSPLKALGVTDMHAHLVPDAAGYSFTAEGGSTLGPFTGNGAVLLPPRGQAIVRIA
RVAASGVTASGDLRPVTGGLDGTLNVSGPVTGTIAFAPVNGIQQLILKLDATDASFDGPT
SIAIRRGKLDATILLDPSGTSINATAQARGMRVGAISIGRLAANAELVDGSGKVRASISG
QRGRLFDITGEAQVEPDRIQLQASGTIDKRPIKLTRAAIFTRTQDGWRLDPASISFAGGS
LQLGGELSGQTTSIEARLQRLPLSLLDIGYDNLGLGGTATGSLSYVHTRGEMPTGKAELR
VRGLSRSGLSLSSRPVDAGVNAVLTHDRLATRMIFVADGQTIGRAQALLTPLGTEGSLVD
RLNRAPLFAQLRYNGTADTLWRLTGVEIVDISGPVGVTADARGTLGNPAITGSLTTDNAA
INSPVTGMRLHGVKARGRFSGAQLVMTDFAATAQNGGSVTGTGSFTFMGLGGVGMDLRLQ
AENAALLERDDIAATVTGPITLNSSGKGGIIGGDLILNRSRFTMGRAAAVAQIPELKVIE
INRRGDEIERPRAVAPWDLAIKARARNRLTVTGLGLESEWRANLDIGGTVASPAIAGTAD
LVRGTYDFAGRRFDLKEGKIQFDGRTPVNPTLDIDAEANVSDLTATIHVGGTGLKPAITF
TSVPALPQDELLSRILFGTSIVNLSAPEALQLASAVGSLQGQGGLDPINAVRRAAGLDRL
RIIAADPTQGQGTSIAAGKYLTRKTYVELITDGQGYSATRIEYQVTRWLSLLAAISTLGR
ESANVRVSKDY
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaactgcccgccaccccgccgcgccgccgccgcgcatgggacagccgctgg
caacgctgggtcgcgggcatcatcgccgcgctgctgctgatcgtcgcgggcgccctggcc
tggctcgacaccgcgcccggccaccgtttcctcgtcgcccgcatcgcccggatcagtccg
ccttcgggcctgcgcatccatgtcgaccggatcgagggcagcatctaccgcaaggcgatc
ctccacgggcttaccctgtcagaccccaagggcgcctttttcgacgcgcccagggtggaa
ctggactggtggcccttcgcctgggcttacaaccggctggacatcgaccggctcgtcatc
ccgcaggcgaccctgcgcaagctgccgaaactcaaccccagcgagcggcaggggccgatc
cttcccggtttcgacatccgcctgatgcaattttccgtcggccgcctgaccatcgaccgg
ggcgtcaacggcaaggtgcaggaggccaccctgtccggcgatgccgacattcgcggcggc
cgggcgatcatcgacctgtcggcccgcgtgctgaatggcgaggatgcgctcaacatcgcg
ctcgacagccgcccggacgacgacaggttcgacctggacgtcaccgtcaacgcgcccaag
ggcggcgtgctggcggtgatggcgggcttgcgccaggatgccaatctgcgcatccagggc
aagggaagctggacccgctgggacggccgcctggcaggcacgctcgacagcgaacccgcc
atcgacctgaaactcgccgcccgcagcggagcctataccgccaccggtacgatcgaaggg
tccgccatagcgggtcagggcctgttccagcgcctctccgccccgcgcctcgccatccag
gccagcggatcgatgactgaccgcgtgatcgacggcaagctctcgctccgctccgccgcc
atcgacctcagcgccgacggcggcatcgacctgcgcaacaatgcgctcgacaatctgctg
gtcgatgtgaagctggcccggccgcaagccctgctcaagtcgatgaacggtcgcgacatc
gcggcccgcgtccgtctggacggcccgctcggcgctttcggctatgaatatctgctgacg
gcaaagcaactggtcttcggcaagacggtgatccacgacgtccgcgccgacggcaagggg
cgcaaggcgaagggcggtcccgcgctgatcccggtccatctgcgcgcccgccgcctggac
gggcagggcgaactggtcgagggcatcatccgcaatttcgtcctggacggcgtgttgcag
ctcaggaaccagcagatcgtcagcaacccgatgacggtccgatccgacaagctgcgcggc
aagctgatcatggtcgcggacctgaagacgggtcgctatgatttcggtctggacgggcag
atcaacggcctcgccattcgcggcctcggcatcgtcgacctgacgtcgaagctgcgcgcc
atccccggtcccaggggcgccttcacgctcagcggcaatgcgatggcgcggatgcggcgg
ctggacaacagcttcctgcgctcgctgggcggcggcctgcccgtgttgcgcagcggcctg
acgctgggaccggacggccagttgcaattcaccaacctccatctccaagcgccgctgatc
accctcgcggccaagggctatcgccgccgcgacggcagcttccatttcgagggcggcggc
cagcataaaagctatggccccttgcgcctgaccctggacggcaagatcgaccgcccgacc
gtcgacctggtcctgcaaagcccgttgaaggcgcttggcgtcaccgacatgcacgcccat
ctcgtccccgacgcggcgggctacagcttcacggcggaggggggatcgacccttggcccc
ttcaccggcaatggcgcggtcctgctgccgccgcgtggccaggccatcgtccgcatcgcc
cgcgtcgcggcgtcgggcgtcaccgccagcggcgacctgcgcccggtcactggcggcctc
gacggcacgctcaacgtcagcggccccgtcaccggcaccatcgccttcgcgcccgtcaac
ggcatccagcaactcatcctcaagctggacgccaccgacgccagcttcgacggccccacc
agcatcgccatccgccggggcaagctggacgcgacgatcctgctcgatccgtccggcacc
tcgatcaacgccaccgcgcaggcgcggggcatgcgcgtcggcgcgatctccatcggccgc
ctcgccgccaatgcggaactggtcgatggcagcggcaaagtccgcgccagcatttccggc
cagcgcggtcgcctgttcgacatcaccggcgaagcgcaggtcgaacccgaccgcatccag
cttcaggcgagcggcaccatcgacaagcgcccgatcaagctgacgcgtgccgccatcttc
acccgcacgcaggacggctggcggctcgaccccgcatcgatcagcttcgcgggcggatcg
ctccagcttggcggcgaactcagcggccagaccaccagcatagaggcgcgcctgcaaagg
ctgccgctgtcgctgctggacatcggctatgacaatctgggcctgggcggcaccgccacc
ggatcgctcagctatgtgcacacgcgcggcgaaatgcctacgggcaaggcggaactgcgc
gtgcgcggcctgtcgcgatccggcctgtcgctcagctcccgcccggtcgatgcgggggtg
aacgctgtcctgacccatgaccggctcgctacccgcatgatcttcgtcgcggacggccag
accatcggccgcgcccaggcgctgctgaccccgctgggcaccgaaggcagcctggtggat
cggctcaaccgcgcgcccctgttcgcgcagcttcgctacaacggcaccgccgacacgctg
tggcgcctgaccggtgtggagatcgtcgacatatccggcccggtcggcgtcaccgccgat
gcgcggggtacgctgggcaaccctgctatcaccggatcgctgacgaccgacaatgccgcg
atcaacagccccgtcaccggcatgcgcctgcacggcgtcaaggcgcggggccgcttttcc
ggcgcgcaactggtcatgacggatttcgccgccaccgcgcaaaatggcggcagcgtcacc
ggcaccggcagcttcaccttcatggggctggggggcgtcggcatggacctgcgccttcag
gctgaaaacgccgccttgctggagagggacgatatcgccgccaccgtcaccggcccgatc
acgctcaattccagcggaaagggaggcatcatcggcggcgacctgatcctcaaccgaagc
cgcttcaccatgggccgcgccgccgccgtcgcgcaaatccccgaattgaaggtgatagag
atcaaccggcgcggcgacgagatagagcgcccccgcgcagtcgccccctgggatctggcg
atcaaggcccgcgcccgcaaccgcctcaccgtcaccggccttggcctcgaaagcgaatgg
cgcgccaatctcgatatcggcggcaccgtcgccagcccggccatagcgggcaccgccgat
ctggttcgcggcacttatgatttcgcgggccgccgtttcgacctgaaggaaggcaagatc
cagttcgacggccgcaccccggtcaacccgacgctcgacatcgatgcggaggcgaatgtc
agcgacctgaccgccaccatccatgtcggcggcactggcctcaaacccgccatcaccttc
accagcgtcccggcgctgccgcaggatgaacttctgtcccgcatcctgttcggcacgtcc
atcgtcaacctgtccgcgcccgaagcgctgcaactcgcttcggcggtcggctcgctccag
ggacagggcggcctcgacccgatcaacgccgtgcgcagggcggcgggcctcgaccgcctg
cgcatcatcgccgccgatccgacgcaggggcaggggacgtccatcgcggcgggcaaatat
ctgacccgcaaaacctatgtggaactgatcaccgacgggcagggctattccgccacccgc
atcgaatatcaggtcacgcgctggctctcgctgctcgccgccatctccacgcttggccgt
gaaagcgccaacgtccgcgtttcgaaggattattaa
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