Sphingobium chlorophenolicum: Sphch_0300
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Entry
Sphch_0300 CDS
T01522
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sch01002
]
Sphch_0300
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sch01011
]
Sphch_0300
Peptidases and inhibitors [BR:
sch01002
]
Cysteine peptidases
Family C82
Sphch_0300
Peptidoglycan biosynthesis and degradation proteins [BR:
sch01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Sphch_0300
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEG48000
UniProt:
F6EVJ6
LinkDB
All DBs
Position
1:complement(303901..305358)
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AA seq
485 aa
AA seq
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MNRPELIRFSVFCLLGAAAVPSVAQPPAVAPTVPAPPAPQVILPPSIVTPPPVPLPRPSA
AQERWLNDWLKGGTQQGLMARSKATGDLRGDALLSAALDRARALSTGRVDTADFLDIWAL
RPAPFDPRPGLAKAISENKLPQWALNLTPPYAGYDGLRKGLANYERIRDAGGWPTLTAQS
APDVVRARVAIEDKSVTPGEKLVDVLQRAQRRYGLNPTGLLDTRTLRELNVPVDDRIAAI
MANMERWRWMPRQLPVNRVQVNIAAAVLTVFEGDEPVTSMRAVTGAPDNATPMLVSSIHS
IVVNPPWNVPASIAKRELWPKGRAALIRQGYKIVGTPETGERIVQPAGPNSALGRLKFDF
NNPFAVYLHDTPSRAKFSSYDRLASHGCIRLEKPVPLAELMMAGNPDLAGKIQSLIDTGK
TQRVSLPREVAVYLLYWTAFASNNGTMSFRSDPYGWDKLLAAKIEASSRRLDPTAAPAAS
IASRD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtcccgaattgatccgtttttccgttttttgcctgctaggcgcggccgccgtg
ccgtccgtcgcgcagccccccgccgtcgcgccgacggtgcccgcgccccccgctccgcag
gtgatcctgccgccctccatcgtgacgccgccaccggtcccgctgccccggccctccgcc
gcgcaggaacgctggctcaacgactggctgaagggcggcacgcagcaggggctgatggcg
cgcagcaaggcgaccggcgaccttaggggcgacgccctgctttcggcggcgctggaccgg
gccagggcgctcagcaccgggcgtgtcgatacggccgatttcctggatatctgggcattg
cgccctgcccccttcgatccccggcccggcttggccaaggcgatcagcgagaacaaactg
ccgcaatgggcgctcaacctgacgccgccctatgcgggctatgacgggctgcgcaagggc
ctggccaattatgagcggattcgcgacgcgggcggctggccgacgctgacggcgcaatcc
gcgcctgatgtcgtacgggcgcgcgtcgccatagaggataaaagcgtcacgcccggcgaa
aagctggtcgacgtgctacaacgggcgcagcggcgctacggcctcaaccccaccggcctg
ctggacacccggacgctccgggaactgaacgtaccggtggacgaccggatcgccgcgatc
atggcgaatatggagcgctggcgctggatgccgcgccagttgccggtcaaccgggtgcag
gtgaacatcgccgccgccgtgctgaccgtgttcgagggcgatgagccggtgacgtccatg
cgcgccgtgaccggcgcgcccgacaatgcgacgccgatgctggtttccagcatccattcc
atcgtggtcaacccgccatggaacgtccctgcttccatcgccaagcgggagttgtggccc
aaggggcgcgccgcgctgatccgccagggttacaagatcgtcggcacgccggaaacgggt
gagcggatcgtgcagcccgccgggccgaacagcgcgttggggcggttgaagttcgatttc
aacaatcccttcgccgtctatctgcacgacacgccgtcgcgggcgaaattctccagctac
gaccgtttggcgagccatggttgcattcgcctggaaaagccggtgccgctggcggaactg
atgatggcgggcaatcccgaccttgccgggaagatccagtcgctgatcgacacgggcaag
acgcagcgtgtctcgctgcccagggaagtggcggtatacctgctttactggaccgccttc
gccagcaataacggcacgatgagtttccgttccgacccctatggctgggacaagctgctg
gccgccaagattgaagcatccagccgccgcctcgacccgaccgccgcgcctgcggcctcc
atcgcatccagggattga
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