Sphingobium chlorophenolicum: Sphch_0376
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Entry
Sphch_0376 CDS
T01522
Name
(GenBank) outer membrane adhesin like proteiin
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sphch_0376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
DUF5801
Cadherin_4
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
AEG48075
UniProt:
F6EWE2
LinkDB
All DBs
Position
1:378961..387696
Genome browser
AA seq
2911 aa
AA seq
DB search
MDFERDWDSKGTADHQQALHPEAAALSAKGKAVHPGKMHHADVVRTVAPNPDGTVVLPAG
TDINQIEVSGRNLIVHLPDGTDMVILDGAVVMPRLVVGDVEIPSVNLAALLIGEEPQPAA
GPPRSSGGNFIGPDGNVGDPHGLGDLLPPTELLFTQPETREILPFAPQDDEEPTVTIITP
NQPAGATAATAGVSEAGLPARGNEPAGSAAAGDSERTTGSIAITATDGLAGVTINGVTIA
TVGQTVTTPLGVLTITSITPGAIGYSYVLSDNVVGAPPAEVFTVVVTDSDGDQASATLTI
SIADDAPTAVNDADSVTEDGPLVADGNVLTGVGGSDANATDGVADIQGADGAVVSTTGSF
QGAYGTLTLTASGAYSYTLANGNAAVQFLLPGQTLTDSFSYTITDADGDTSTATLTITIN
GADDGVTINGLNGTPGIEGAEVVLLENDLSDGSSPDAAGLTKTGSFGVNGPDGLSSVTVG
GVSVLSNGAFVAGQVVTTPVGTLTITGFTATATQGGVPTAGTFTYSFVLTDNSLNHGAAG
ADSILQSFAVVATDRNGSAANATVDVRIVDDVPTANNDVDGVAAGTYGPETGNVITGAGT
VSGAAGADVKGADGAVVSTTGTFEGTYGTLTLNADGSYSYVRAAGTPGGVSDSFSYTLRD
GDGDLSTATLRIDIANSNVMIISIPKVGEGTIVDESGLVDPMGSNAGSGVDTTDGTITYT
APDGPATITINNIPITGVGQEIVTDKGILTITGLSNGSIDYSYTLTTNTTGDDVTDSFVV
TVTDVDGDTATDTLTITILDDVPTAAADVDSVREDGPLVADGNVITGSGGSDANGTDGNA
DVQGADGAQVSAIAFGGTAGTVGAPLAGLYGSLVIQANGSYAYTLNNENGVVQGLDKNEA
LTETFTYTLTDGDGDPSSATITITIQGSDDGVTINGLDGEGAEETVFENDLPGGSSENAA
ALTQTGSFTLSAPDGVATVTVGGQPIFGAGGFIGGVTIANAYGTLSITGFTPTVGADGDV
TGGTVSYSYVLTDNTLLHSGVNDGSLTDSFAVVVTDTDGSTDSASLDIRVVDDVPTAVND
VAGQLTENAAVTIDVFANDVAGADGVNLASGVALETGAAKGTVVYQGNGVFLYTPNAGAE
GSDSFTYTITDGDGDKSTATVTINLLQDSTPTVSVTDMTVSEAGLPGGTQQAGNSETATG
AMTIATGGDTLTKVEVQDKNGAWVNVTGATAGTPVVVAGAAGTLTVTSDGVGHYSYSYTL
AVNDPTHPDTITSDGDGISGAADPKAGDAFAVRVTDSDGDVSPADAINVTVLDDAPIATA
DSGSVSEGGSLIVAASGVLANDQPGADGYAPGVVGVAKGNDIATPVSGQVGIAVAGDYGT
LTLFADGSYRYDATPNAISADQQDVFVYTIRDADGDLATTTLTINVANVALAADNQTKTV
FEAALDTSITGSDIAAGSVTGSAPGQTTETATGQLNVVGAVSYTLTSSATGSHGQIQLNA
NGSYTYTLTSPVDGPTANDGPLTFAGAEVFTYQAVDGSGNVANGTITIDVVDDVPTAADD
ALLTVAEDGADIGGNVLTNDTPGADGATLTSVTIGGVTTAVNAVGTTNVSGAFGAYTFTA
AGAWTFNPSTNLNNASGVSAGFSYVITDGDGDQSTAVQPITVTDGAIPVAGDPISLALDD
QNLAGGTSAGNPDFVQDNVSFTAGSDALTGFAFATDLSALGGGLTWNRVSATLIEGWDGP
VGTGVKIVALTLTSPASIGAGLSGNVQVTATLLDNYDSHPGINLDDSVALGSVGVVASDQ
DGDSVTATVNLSVSDDVPLAANDGQLAIVDDNASGVVIGTVAGLLGNDAFGADGPGSPAI
AIGAGNLGGTISIVGGNLVYTSHHNIAAPYASIGETFTYTIKDGDGDTSSATFSVLLTDT
GPSISAAAAAFTVDEDGLANGVTQPVTGDVDGADIVKTGTLAGLSFGNDGPGNIVLGAVA
DTGLRTLSNHVIQTVWDGTSHMLTGKDAVTGDNVFTLQITDVASGAYRFELLAPVKHSDP
ASEDDKSFTVAVTVTDAENESAGGTISVTIDDDSPAVTATLPAAGSLVVDESNLAFDATA
SFAGNFTALFGADGKGSLSYSLGVSAQGAATNLFDTATGNRVYLFVESGKVVGREGTSSG
NAAGGPVVFQLTVDALGAVTLDQQRAVLHTPDTGPNQAIGLDVGSLITLTATAVDGDGDT
VSQQINFGQTISFLDDVGTLGAFSNITVVNGANVVGNGTFSYNAGADGHGSFAITGPVLP
GISYTTTQNATGALLTATTDPDGPGGNAPVTVFTLQVNADGTSVFTLVTPQAATSETISL
LGLSAGGPTPFVQTADGRVEFTGSGNGVNSSTQGFGVDNQFVGNGENFTIEFHNPGQAGD
QAATVNPDMVSSIILKNDNINGSLSIKVTVYNDVTGQSEVVYTSFNVTGTSTTIDPVMSE
FNRVSVEGVGGSGQGVRFTTLVINKTILPSDIDLHFNVQATDKDGDVTSTSTLNVFVDAT
SPTPPVAIDLNGDGLHFVGLDAGVTHDYGSGAVATAWVSSEDGLLGHVTGKGIDIVFTDD
APGAQSDLEGIRLAYDSNGDGKMDAADTAFQEFGVWQDANGNGAVDQGEFKSLADLGIAS
IDLNSDGKTYSAANGDVTVLGEASFTRTDGTKGTVGDVIFATGSGDAAKTTESAASGFNQ
ALVAASLVAVVGAAEATTEQQPAPTTTETAAPVTETAPAATVSDEPTTTQESAPTTLAAN
DDQAAHEQPAPTGHAGEEAAPEHATLSDGGDAHAPAETAEAPQPDLSGHQGLLAQSIDLP
PAFDGNAAAVLAAQAAPAANAADVVKEALGAHDAPNIDALLAALPGGEHAAMPALLNPVA
GDAVDSGHLAAATAIFDAAMVAHEAMAVAHG
NT seq
8736 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgagcgcgattgggacagcaaaggcaccgccgaccatcagcaggcccttcat
ccggaagcggccgccctgagcgcgaagggcaaggcggtccatcccggcaagatgcatcat
gcggacgtcgtgcggacggtcgcgcccaatcccgacggcaccgtcgtgctgccagccgga
accgacatcaaccagatcgaggtttccggacgcaatctgatcgtccacctgcccgacggc
accgacatggtgatcctggacggcgcggtggtcatgccgcgcctggtcgtgggcgatgtc
gaaattccctcggtcaacctggccgcgctgctgatcggcgaagaaccgcagcccgccgcc
ggtccgccgcgcagctccggcggcaatttcatcggcccggacggcaatgtgggcgatccc
catggcctgggcgacctgctgccgcccaccgaattgctgttcacccagcccgaaacgcgg
gaaatcctgccattcgcgccgcaggatgatgaagagccgacagtcaccatcatcaccccc
aaccagccggccggcgccaccgccgccaccgcaggggtgagcgaagcgggccttcccgcg
cgcggtaatgaacccgccggttcggccgccgcgggcgacagcgaacgcaccacgggcagc
atcgccatcaccgccaccgacgggctggcgggcgtgaccatcaacggcgttacgatcgcc
acggtcggccagacggtcacgacgccgctcggcgtgctcaccatcacctcaatcacgccg
ggcgccatcggctacagctatgtgctgagcgacaatgtggtgggcgcgcctccagccgaa
gtcttcaccgtcgtcgtcaccgacagcgatggcgaccaggcgagcgccaccctgaccatc
tccatcgcggatgatgctccgaccgccgtcaacgatgccgacagcgtgaccgaggacggc
ccgctggtcgccgacggcaatgtcctgaccggcgtaggcggcagcgatgcgaacgcgacg
gacggcgttgcggacatccagggcgcggacggcgcggtcgtgtcgaccaccggcagcttc
cagggcgcttatggcacgctgacgctgacggcgtcgggcgcctacagctatacgctggcc
aacggcaatgcggcggtgcagttcctgctgcccggccagacgctgaccgacagcttcagc
tatacgatcaccgatgccgatggcgacacctccacggcgacgctgaccatcactatcaac
ggcgcggacgacggcgtcaccatcaacggcctgaacggcacgccggggatagagggcgcc
gaagtcgtccttctggaaaacgacctgtccgacggcagctcgcccgatgcggcgggcctg
accaagaccggctcctttggcgtcaatggccctgacggcctgtcgagcgtcactgtcggc
ggcgtgtccgtgctgtcgaacggcgctttcgtcgccgggcaggtggtgacgacgccggtc
ggcacgctgaccatcaccggcttcaccgccaccgccacgcagggcggcgtgccgacggcc
ggaaccttcacctatagtttcgtgctgaccgacaacagcctgaaccacggcgcggcgggc
gcggacagcatcctgcaaagcttcgccgtcgtcgcgaccgaccgcaacgggtcggccgcc
aatgccacggtcgacgtgcgcattgtggacgacgtgccgaccgccaacaatgatgtcgat
ggcgtcgccgccggcacctatggcccggaaaccggcaatgtcatcacgggcgcaggcacc
gtctccggcgcggcaggtgccgacgtcaagggcgcggacggcgcggtcgtgtcgaccacc
ggcacgttcgagggcacgtacggcacgctgacgctgaacgccgacggcagctacagctat
gtccgtgcggcgggcacgccgggcggggtgagcgacagcttcagctacacgctgcgcgac
ggcgacggcgacctgtccaccgccacgctgcggatcgacatcgcgaacagcaacgtcatg
atcatctccatccccaaggtgggcgaaggcacgatcgtcgacgaatccggcctggtcgac
ccgatgggctccaatgcgggcagcggcgtcgacacgacggacggcaccatcacctacacc
gcgccggacggtccggcgacgatcaccatcaacaatatcccgatcaccggcgtgggccag
gaaatcgtcacggataagggcatattgacgatcaccggcctcagcaacggcagcatcgat
tacagctacacgctgacgaccaacacgaccggcgacgatgtgaccgacagcttcgtcgtc
accgtcaccgacgtagacggcgacacggcgaccgacacgctgaccatcaccatcctggac
gacgtgccgaccgccgccgcggatgtggattcggttcgcgaggatggcccgctggtggcg
gacggcaacgtcatcaccggctcgggcggcagcgacgccaacggcaccgacggcaatgcc
gacgtgcagggtgccgacggcgcgcaggtttccgccatcgccttcggcggaacggccgga
accgtcggcgcgccgctggccgggctgtacggatcgctcgtgatccaggcgaacggcagc
tatgcctatacgctgaacaatgaaaatggcgtggtccagggcctggacaagaatgaggcc
ctgaccgagaccttcacctacacgctgaccgacggcgacggcgatccgtccagcgctacc
atcaccatcaccatccagggcagcgacgatggcgtgaccatcaacggcctggacggcgaa
ggggcggaggaaaccgtcttcgaaaacgacctgccggggggcagttcggaaaatgcggcg
gcgctgacccagacgggcagcttcaccctgtccgcgccggacggcgtggcgaccgtcacg
gtcggcggccagcctatcttcggcgcgggcggcttcatcggcggcgtcaccatcgccaac
gcctatggcacgctcagcatcaccggcttcacgcccactgtgggtgcggacggcgatgtg
accggcgggaccgtcagctacagctatgtcctcaccgacaacacgctgctgcacagcggc
gtcaatgacggcagcctgacggacagtttcgcggtcgtcgtcaccgacacggacgggtcg
accgacagcgccagcctggacatccgcgtcgtcgacgacgtgcccacggcggtgaacgac
gtcgcgggccagctcactgaaaatgcggcggtgacgatcgacgtcttcgccaatgacgtg
gccggggcggacggcgtcaacctggccagcggcgtggcgttggaaaccggcgcggccaag
ggcacggtcgtctatcagggcaatggcgtcttcctctacacccccaatgcgggcgcggag
ggcagcgacagcttcacctacacgatcaccgacggcgacggcgacaagtccaccgccacg
gtgaccatcaacctgctccaggattcgacgccgaccgtcagcgtcaccgacatgaccgtg
tccgaagcgggcctgcccggcggcacgcagcaggccgggaacagcgagaccgcgaccggc
gctatgaccatcgcgaccggcggcgacacgctgaccaaggtcgaggttcaggacaagaac
ggcgcctgggtcaacgtcaccggcgcgaccgcgggaacgccggtggtcgtcgcgggcgcg
gcgggcacgctgaccgtgacgtccgacggggtggggcattacagctacagctatacgctg
gcggtcaacgacccgacccatcccgacaccatcaccagcgacggcgacggcatcagcggc
gcggccgaccccaaggcgggcgacgccttcgcggtgcgcgtgaccgacagcgacggcgac
gtctcgcccgccgatgcgatcaacgtgaccgtgctggacgatgcgcccatcgcgacggcc
gacagcggttcggtgagcgaaggcggatcgttgatcgtcgcggccagcggcgtgctcgcc
aatgaccagccgggcgcggacggctatgcgccgggcgtggtcggcgtggctaagggcaac
gacatcgccacgcccgtcagcggccaggtcggcattgcggtcgcgggcgattacggcacg
ctgacgctcttcgccgacggcagctaccgctatgacgcgactcccaacgccatctcggcc
gatcagcaggacgtgttcgtctacaccattcgcgatgcggacggcgacctggcgaccacg
actttgacgatcaacgtcgccaatgtcgcgctggcggcggacaatcagaccaagaccgtt
ttcgaagccgcgctggataccagcatcaccggatcggacatcgcggcgggcagcgtcacc
ggcagcgcgccgggccagaccacggaaacggcgacgggccagctcaacgtcgtgggcgcc
gtcagctacacgctgaccagttccgccaccggcagccatggccagatccagttgaacgcc
aatggcagctatacctacacgctgacctcgccggtggacggcccgacggccaatgacggc
ccgctgaccttcgcgggcgcggaggtcttcacctatcaggcggtcgacggctccggcaat
gtcgccaacggcaccatcaccatcgacgtggtggacgatgttccgacagcggcggacgat
gctctcctgaccgtggcggaggacggcgccgacatcggcggcaatgtcctgaccaacgac
acgccgggcgcggatggcgcgaccctgacgtccgtcaccatcggcggcgtcacgacggcg
gtcaacgccgtaggcacgaccaacgtcagcggagccttcggcgcctacaccttcacggcg
gcaggcgcgtggaccttcaacccgtcgaccaacctcaacaatgccagcggggtcagcgcg
ggcttctcctacgtcatcaccgatggcgacggggaccagtcgaccgccgtgcagccgatc
acggtcacggacggcgcgatccccgtcgcaggcgacccgatcagcctggcgctggacgac
cagaatctggcgggcggcaccagcgcgggcaatccggacttcgtgcaggataatgtcagc
ttcacagccggatcggatgcgctgaccggcttcgccttcgccacggatctgtccgccctg
ggcggcggcctgacctggaaccgcgtcagtgccacgctgatagagggttgggacggtccg
gtcggcacgggcgtcaagatcgtcgcgctgacgctgacgtcgcccgcctccatcggcgcg
ggcctcagcggcaatgttcaggtgacggcgacgctgctcgacaattatgacagccatccg
ggcatcaatctggacgacagcgtcgccctgggcagcgtcggcgtcgtcgcatccgatcag
gatggggatagcgtcaccgcgacggtcaacctgtcggtctcggacgatgtgccgctggcg
gccaatgacggccagttggccatcgtcgacgacaatgccagcggcgtggtcatcggcacg
gtcgccgggctgctgggcaatgacgccttcggcgcggacggcccaggctcgcccgccatc
gcgatcggcgccggcaatctgggcggcaccatttcgatcgtcggcggcaacctcgtctac
acgtcgcaccacaatatcgcggcgccttacgcctccatcggcgagacgttcacctatacc
atcaaggatggcgacggcgacacatcctcggccaccttttcggtcctgctgaccgataca
ggaccgtcgatcagcgcggcggcggcggccttcacggtcgatgaggacggtcttgccaac
ggcgtgacccagccggtgacgggcgatgtggacggcgcggacatcgtcaagaccgggacg
ctggcggggctgagcttcggcaatgacggccccggcaatatcgtgctgggcgcggtggcg
gacacgggcctgcggaccctgtccaaccatgtgatccagacggtatgggacggcacgagc
cacatgctgaccggcaaggatgcggtgacgggggacaatgtcttcacgctgcagatcacc
gatgtggccagcggcgcctatcgtttcgaattgctggcgcccgtcaagcacagcgatccg
gcgagcgaggacgacaagtccttcaccgtcgcagtgaccgtgacggatgccgagaatgaa
agcgccggcggaacgatcagcgtcaccatcgacgacgacagcccggcggtgacggcgacc
ctgcccgctgcgggttcgctggtcgtcgatgaaagcaacctggcgttcgacgccacggcc
agcttcgcaggcaatttcacggcgctcttcggggccgacggcaagggatcgctcagctat
tcgctcggcgtcagcgcgcagggcgcggccaccaacctcttcgataccgccaccggcaat
cgcgtctatctgttcgtggaatcgggcaaggtcgtgggccgcgaaggcaccagttcgggc
aatgcggccgggggtccggtcgtgttccaactgacggtcgacgccctcggcgcggtgacg
ctggaccaacagcgcgccgttctgcatacgcccgataccggacccaatcaggccatcggc
cttgatgtgggcagcctcatcaccctcacggcaaccgccgtggacggcgacggcgatacg
gtgagccagcagatcaatttcggccagaccatcagcttcctggacgatgtcggcacgctt
ggcgcgttcagcaacatcaccgtcgtcaacggcgccaatgtcgtgggcaacggcacgttc
agctataatgcgggggccgatgggcatggcagcttcgccatcaccggcccggtgctgccc
ggaatcagctacaccaccacgcagaacgccacgggcgcgctgctgacggccacgaccgat
cccgacgggccggggggcaatgcgccggtcaccgtcttcacccttcaggtgaatgcggac
ggcacgtcggtcttcacgctggtgaccccgcaggcagcgaccagcgagacgatctcgctg
ctgggtctcagcgcgggcggtccgacccccttcgtgcagacggcggacggccgggtcgaa
ttcaccggcagcggcaatggcgtgaattcgtccacccagggtttcggcgtcgacaatcaa
tttgtcggcaatggcgaaaacttcaccatcgaattccacaatccgggacaggcgggcgat
caggccgccaccgtcaatccggatatggtgagttccatcatcctcaagaacgacaacatc
aacggatcgctgagcatcaaggtcacggtctacaacgacgtgactggccagtcggaggtg
gtctacaccagcttcaacgtcaccggcacgtccaccacgatcgatcccgtgatgtcggaa
ttcaaccgcgtttcggtcgagggcgtgggcggcagcggtcagggcgtccgcttcaccacc
ctggtcatcaacaagacgatcctgccttccgacatcgacctgcatttcaacgtgcaggcc
accgacaaggatggcgacgtcacctccacctcgacgctcaacgtcttcgtcgacgcgacc
agcccgacgccgccagtggcgatcgacctgaacggcgacggcctgcatttcgtgggcctg
gatgcgggcgtcactcatgattatggcagcggcgcggtggcgacggcatgggtgtcgtcc
gaagacggactacttggccatgtcacgggcaagggcatcgacatcgtcttcaccgacgat
gcgcccggcgcgcagagcgaccttgagggcatccgcctggcctatgacagcaatggcgac
ggcaagatggatgcggccgacaccgctttccaggaattcggcgtctggcaggacgcgaac
ggcaacggcgcggtcgatcagggcgaattcaagtcgctggccgaccttggcatcgcgtcc
atcgacctgaattccgacggcaagacgtacagcgccgccaatggcgacgtcacggtgctg
ggcgaagcgagcttcacccgcaccgacggcaccaagggaacggtcggcgacgtcatcttc
gccaccggcagcggcgatgccgccaagacgacggaaagcgccgccagcggcttcaatcag
gcgctggtcgcggccagcctggtcgcggtggttggcgcagccgaagcgacgacggagcag
caacccgccccgacgacgaccgaaaccgccgcgccggtcacggaaaccgcgcccgcagcc
acggtatcggacgagccgaccacgacgcaggaaagcgcgccgaccacgcttgccgcgaac
gacgatcaggcggctcatgaacagcccgcgccgaccggccatgccggtgaggaagccgcg
ccggaacatgccaccctgtcggacggcggcgacgcccatgctcccgccgaaacggcggaa
gcgcctcagcccgacctcagcggtcatcagggtctgttggcgcaatccatcgacctgccg
cccgccttcgacggcaatgcggcggcggtgctggcggcccaggctgctccggcggcgaat
gcggccgatgtcgtgaaggaagcgctgggcgcccatgacgcgccgaacatcgacgcgctg
ctggccgccctgccgggtggagaacatgccgcgatgcctgccttgctgaacccggtcgcg
ggcgatgcggtggacagcgggcatctggcggcggccacggcgatcttcgacgcggcgatg
gtcgcgcatgaagcgatggcggtcgcccatggctga
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