Sphingobium chlorophenolicum: Sphch_0560
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Entry
Sphch_0560 CDS
T01522
Name
(GenBank) Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase trmFO
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sch03016
]
Sphch_0560
03036 Chromosome and associated proteins [BR:
sch03036
]
Sphch_0560
Enzymes [BR:
sch01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
Sphch_0560
Transfer RNA biogenesis [BR:
sch03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
Sphch_0560
Chromosome and associated proteins [BR:
sch03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Sphch_0560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDA
Pyr_redox_2
NAD_binding_8
DAO
FAD_oxidored
FAD_binding_3
FAD_binding_2
AlaDh_PNT_C
Pyr_redox
HI0933_like
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AEG48255
UniProt:
F6EXX3
LinkDB
All DBs
Position
1:complement(585184..586521)
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AA seq
445 aa
AA seq
DB search
MHQVHIIGGGLAGTEAAWQLAQAGVKVRLSEMRGSGDMTPAHQTEGLAELVCSNSFRSDD
ADKNAVGLLHQEMRRLGSLIMAQAEPAKVPAGSALAVDRHIFSDGVTNALASHPNVEIVR
ERIDMLPMEGMTIVATGPLTAPALAASIGQAAGIDHLAFFDAIAPVVHHDSIDMDKCWMA
NRWDKIGPGGGEGKDYINCPMNKEQYQAFVQGLLGGEKTDFKEWEKDTPYFEGCMPIEVM
ASRGPETLRHGPMKPMGLDDPRTGRWPYAVVQLRQDNASGTLWNMVGFQTKLKHGAQTEL
FRTIPGLEKAEFARLGGLHRNTFIQSPKLLDATLRLKSAPHIRFAGQVTGCEGYVESGAI
GLLAGRFAAAEILGKPLAPLPPETALGALLGHVIGNVETADYQPMNVNFGLFPPLEDVKK
KQRKEAMTARARAALGQWLGELQPA
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaggttcatatcatcggcggcggactcgcgggcacggaagcggcatggcaattg
gcgcaggcgggcgtgaaggtccgcctgtcggaaatgcgcgggagcggcgacatgaccccc
gcgcaccagaccgaggggctcgcagaactggtctgctccaacagcttccgttcggacgat
gcggacaaaaatgccgtaggcctgctgcatcaggagatgcggcggctgggatcactgatc
atggcgcaggcggaaccggccaaggtgcccgccggatcggcgctggcggtggaccggcat
attttctccgacggtgtgacaaatgcgctggccagccatcccaatgtggagatcgtgcgc
gaacgcatcgacatgctgcccatggagggcatgaccatcgtcgccaccggcccgctgacc
gctcccgcactcgccgccagcatcgggcaggcggcggggatcgaccatctcgcctttttc
gacgccatcgcgccggtcgtgcatcatgacagcatcgacatggacaaatgctggatggcc
aatcgctgggacaagatcggccccggcggcggcgagggcaaggactacatcaactgcccc
atgaacaaggagcagtatcaggccttcgtccaggggctgctcggcggggaaaagaccgac
ttcaaggagtgggaaaaggacacgccctatttcgaaggctgcatgccgatcgaagtgatg
gcgtcacgcggcccggaaacgcttcgtcacggaccaatgaagccgatgggcctggacgac
ccgcgcaccgggcgctggccctatgccgtggtgcagttgcggcaggacaatgcgtccggc
acgctgtggaacatggtcggattccaaaccaagctgaaacatggcgcgcagaccgaattg
ttccgcactattccgggtctggagaaggcggaattcgcgcggttgggcggattgcatcgc
aacaccttcatccagagtcccaaactgctcgacgccacgctgcgcctcaaaagcgcgccg
catatccgctttgccgggcaggtgacgggttgcgagggttatgtcgagagtggggccatc
ggcctgctcgccggacgctttgctgcggcggaaatattgggcaagccgctggcaccgctg
ccgcccgaaacggcgctgggtgcgttattgggacatgtcatcggcaatgtggaaacggcg
gactatcaaccgatgaacgtcaatttcggcctgttcccgcccttggaagacgtcaagaaa
aagcagcgcaaggaagccatgaccgcccgcgcccgcgctgcactgggccaatggctgggc
gagcttcagcccgcctga
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