Sphingobium chlorophenolicum: Sphch_0604
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Entry
Sphch_0604 CDS
T01522
Name
(GenBank) o-succinylbenzoate--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch00061
Fatty acid biosynthesis
sch00071
Fatty acid degradation
sch01100
Metabolic pathways
sch01212
Fatty acid metabolism
sch02024
Quorum sensing
sch04146
Peroxisome
Module
sch_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sphch_0604
00071 Fatty acid degradation
Sphch_0604
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sphch_0604
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sphch_0604
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sch01004
]
Sphch_0604
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sch04147
]
Sphch_0604
Enzymes [BR:
sch01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sphch_0604
Lipid biosynthesis proteins [BR:
sch01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sphch_0604
Exosome [BR:
sch04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sphch_0604
Exosomal proteins of breast cancer cells
Sphch_0604
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
AEG48299
UniProt:
F6EYD4
LinkDB
All DBs
Position
1:complement(642428..643963)
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AA seq
511 aa
AA seq
DB search
MSLTIGGVDPARRDQLALADERVTYDWRQLDELLNRAANALNGLALTERRVAVFAPNSAE
TVIAYVACLEAGISSVPVSFHLTPSEAAYILKDSGAVALLVGPETMEAGLAAAQEAGVET
VIGWRCPDREGVVHWEDWIATASADEPNPDVPPLPHLHYTSGTTGRPKATETPPQYFPRV
ATVKALAEAIRQRVTPSPGIAVGPLYHTGPLGMARNVFGGMSLITVEHFDAEKTLALIEK
YKVAGSVMVPTHFQRMLALPEEVRAKYDVSSIQRLAHTGAACPRAVKQAMIDWFGPVLVE
AYGGTEAGSTTFITSPEWLERPGSVGKALPPFETVIYGEDGQILGPNEVGQVYFRDRTGY
GIVYRNDPEKTAAAHIAPGVFTLGEMGYVDAEGYLFITDRVSDMIVSGGVNIYPAESEHV
LLRHPKVADVAVVAAPNAEMGEEARALVIPKDAGDPPTAEELNAFCRANLAGYKCPRGYE
MVDDIGRTVMGKVNKKALRQRFWPSDRTIGG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaccatcggcggggtcgatcccgcgcgccgcgaccagcttgcccttgccgac
gagcgggtgacctatgactggcgccagttggacgaactgctcaaccgggcagccaatgcg
ctgaacgggctggccctgaccgaacggcgcgtggcggtgttcgcgcccaacagcgcggaa
acggtgatcgcctatgtcgcctgtctggaggcgggcatttcgagcgtgccggtcagcttt
cacctgaccccttcggaggcggcctatatattgaaggacagcggcgcggtggcgctgctc
gtcgggccggagacgatggaggcgggacttgccgccgcgcaggaggctggcgtggagaca
gtgatcggctggcgttgccccgatcgggaaggcgtcgtccattgggaggactggatcgca
accgcctccgccgatgagccgaaccccgacgtgccgcccctgccgcacctccattacacc
tccggcaccacgggacggcccaaggcgaccgagacgccgccgcaatatttcccccgcgtg
gcgaccgtgaaggcgctggccgaagcaatccgccagcgtgtcacgccttcaccggggatc
gccgtgggtccgctttatcataccggcccgctgggcatggcccgcaatgtcttcgggggc
atgagcctgatcactgtcgagcatttcgacgcggaaaagacgctggcgctgatcgagaaa
tataaggtcgcggggtccgtgatggtgccgacgcattttcagcggatgctggccctgccg
gaggaggtccgggcgaaatatgacgtgtcgagcatccagcgcctcgcccataccggcgcg
gcatgccctcgcgccgtcaagcaggcgatgatcgactggttcgggccggtgctggtggag
gcctatggcgggacggaggcgggatcgaccaccttcatcacctcgccggaatggctggag
cggccggggtccgtgggcaaggcgctgccgccgttcgagacggtgatctatggcgaggac
ggccagatactcggcccgaacgaggtcgggcaggtctatttccgcgaccggaccggatat
gggatcgtttatcgcaacgacccggaaaaaaccgccgccgcccatatcgcgccgggcgtc
ttcaccctgggcgagatgggctatgtcgatgcggaggggtatctcttcatcaccgaccgc
gtgtccgacatgatcgtgagcggcggggtgaacatttacccggccgaatccgaacatgtg
ctgctgcgtcatcccaaggtggcggacgtcgccgtggtcgccgcgcccaacgccgaaatg
ggggaggaagcgcgggcgctggtcattccgaaggacgcgggcgatccgccaacggcggag
gaactcaacgccttctgccgggcgaacctggccggctataaatgcccgcgcggctatgag
atggtcgacgatatcggccgcaccgtcatggggaaggtcaacaagaaggcgctgcgccag
cgcttctggccttccgaccggaccatcgggggctga
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