Sphingobium chlorophenolicum: Sphch_0638
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Entry
Sphch_0638 CDS
T01522
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sch03032
]
Sphch_0638
03036 Chromosome and associated proteins [BR:
sch03036
]
Sphch_0638
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_0638
DNA replication proteins [BR:
sch03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sphch_0638
Chromosome and associated proteins [BR:
sch03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Sphch_0638
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Sphch_0638
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
GTP_EFTU_D2
DUF2267
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
AEG48333
UniProt:
F6EYG8
LinkDB
All DBs
Position
1:676651..676923
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQDLIGAVAESSGLSKSDASKAVEGVFDAITGALKKGDEVRLVGFGTFSVSQRKASTG
RNPRTGETMTIKASAQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatcttatcggcgctgtcgctgaaagcagcggcctttccaagagcgac
gccagcaaggcggtagagggcgttttcgacgcgatcaccggcgcgctgaagaagggcgac
gaagtgcgcctggtcggtttcggcactttctccgtttctcagcgcaaggcctctaccggc
cgcaacccgcgcaccggcgaaacgatgaccatcaaggcgtccgcccagccgaagttcaag
gccggcaagggtctgaaggactcggtcaactaa
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integrated database retrieval system
