Sphingobium chlorophenolicum: Sphch_0770
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Entry
Sphch_0770 CDS
T01522
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sphch_0770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sch03019
]
Sphch_0770
03009 Ribosome biogenesis [BR:
sch03009
]
Sphch_0770
03036 Chromosome and associated proteins [BR:
sch03036
]
Sphch_0770
Enzymes [BR:
sch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Sphch_0770
Messenger RNA biogenesis [BR:
sch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sphch_0770
Ribosome biogenesis [BR:
sch03009
]
Eukaryotic type
90S particles
RNase
Sphch_0770
Prokaryotic type
rRNA processing factors
Sphch_0770
Chromosome and associated proteins [BR:
sch03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Sphch_0770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-ProteinID:
AEG48465
UniProt:
F6EZV4
LinkDB
All DBs
Position
1:834654..835337
Genome browser
AA seq
227 aa
AA seq
DB search
MKSTAHGPDTEGWLTALIGRKPKDPAAFTQALTHGSANAVNYERLEFLGDRILGLLIAEW
VYDRFSTEPEGKLSRRFNALVSGETCAEVARSAGVPTHLILGKQARDDGAADSDNVLGDV
MEALIGALYLEGGLKEARTLVRRLWADRVDTQASAPKHPKSALQEWAAANKRKPPEYAMT
DRSGPHHALKFTVTVSIKGAGEASATGGSKQEAETAAAKALLDKLTT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatcgaccgcgcatgggccggacaccgaaggctggttgacggcgctgatcggccgc
aagccgaaggatccggccgccttcacccaggcgctgacccatggcagcgccaatgccgtg
aattatgaacggctggagtttctgggcgaccgcatccttggtctgctgatcgccgaatgg
gtctatgaccgcttttcgaccgaaccggaaggcaagctgtcccgccgcttcaacgcgctg
gtgtcgggcgaaacctgcgccgaagtggcccgcagcgccggggttccgacccacctcatc
cttggcaagcaagcccgcgacgatggcgcggccgacagcgacaatgtgctgggcgacgtg
atggaggcgctgatcggcgcgctctatctggagggggggctgaaggaagcccgcaccctc
gtccgccgcctctgggccgaccgcgtcgacacgcaggcgagcgcgcccaaacatcccaag
tccgccctccaggaatgggccgccgccaacaagcgcaaaccgcccgaatatgcgatgacc
gaccgctccggcccgcaccacgcgctgaaattcacggtaacggtcagcatcaagggcgca
ggcgaagcaagcgcgacgggcggatcgaaacaggaagcggaaacggcagcagcaaaggcc
ctgctggacaagctgaccacctaa
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