Sphingobium chlorophenolicum: Sphch_0790
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Entry
Sphch_0790 CDS
T01522
Name
(GenBank) uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sphch_0790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_0790
Enzymes [BR:
sch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sphch_0790
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sphch_0790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEG48484
UniProt:
F6EZX3
LinkDB
All DBs
Position
1:858705..859427
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AA seq
240 aa
AA seq
DB search
MRGLLRENAADAANAYMAWWNLAGVDCPVGEEPVDWLRPAQTPARPAISIGDDGPVPAHA
PAKPASFAAFLTWLSEDAAQPERRWPGAMILPEGPAEAPLMVITDMPDPADVAAGTLLSD
RAGQLFDGMLRAIGLKRADIHLASLFLSRPPGAMVEASDLAAAAARMRTHVMLAAPRRLL
LLGDRTIRSLLPDAGSRIFNHDGGTLAAFATFHPRLLLGQPAAKAECWRVLQGLIEEMSE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcggggattattgcgggaaaatgcggcggacgccgccaatgcctatatggcatggtgg
aatctggccggcgtggattgcccggtcggcgaggagccggtcgattggctgcgccctgcc
cagacgcctgcccggcccgcgatttcgatcggcgacgacggtcccgtgcccgcccacgct
cccgcaaaaccggcttccttcgccgccttcctgacctggctttcggaggatgcggcacag
ccggaacggcggtggccgggcgccatgatcctgccggaaggaccggccgaagcgccgctc
atggtgatcaccgacatgccggaccctgccgatgtggcggcgggaacgttgctcagcgat
cgcgcggggcagttattcgacggaatgttgcgggcgatcggcctgaagcgcgccgacatt
cacctggcgtcccttttcctgtcccggccgccgggcgccatggtcgaggcgtccgatctg
gcggccgcagcggcgcgaatgcgcacgcatgtgatgcttgccgcgccgcgccggttattg
ctgctgggcgaccggacgatccgcagcctgttgcctgatgctggttcacggatatttaac
catgatggcggcaccttagccgccttcgccacatttcacccgcgtttgctgcttggccaa
cccgcggcaaaggcagaatgttggcgtgtgctgcaaggtttgattgaggaaatgtccgag
tga
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