Sphingobium chlorophenolicum: Sphch_0794
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Entry
Sphch_0794 CDS
T01522
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03030
DNA replication
sch03430
Mismatch repair
sch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sphch_0794
03430 Mismatch repair
Sphch_0794
03440 Homologous recombination
Sphch_0794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sch03032
]
Sphch_0794
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_0794
Enzymes [BR:
sch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sphch_0794
DNA replication proteins [BR:
sch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sphch_0794
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sphch_0794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
T2SSK
tRNA_anti-codon
Scaffold
COE1_HLH
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AEG48488
UniProt:
F6EZX7
LinkDB
All DBs
Position
1:complement(862915..866451)
Genome browser
AA seq
1178 aa
AA seq
DB search
MPHAGFVPLRVFSSFTMLEGAIDPKKIAKQAKALGFPAAAITDRNGLYGSMAFSDACKGE
GVQPVIGAMVGVARPDRPANAPPVHDWIALYAQDAAGYDNLCALVSMAHLERPVEEVPHI
SLAMLEGRTDGLIALTAGGEGALARLFAEDQPAAALAYAKRLEALFPDRLYIEICRRLDP
VEGKAEPELLDLAYARNLPLVATNPTCFAEPHFHEAHDVMLCIADSAYVETPDRRTSSPD
AWMKPAAEMKRLFEDLPEALANTLVVAQRCAVAAPKRKPILPSLAGDIEGEAKMLREQAA
EGLEARLAKAGIIDEEARKPYFDRLKFETDIIIQMGFPGYFLIVADFIKWAKDQDIPVGP
GRGSGAGSVVAWALTITDLDPLQLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQQ
KYGADHVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWTLERSLNGV
AEFRAEYDNDNQVRRLIDYAMKLEGFPRHSSTHAAGVVIGDRPLSQLVPLYRDPRSDMPV
TQFDMKYVEGAGLVKFDFLGLKTLSVLQKAVQLLAGRGVEIDLNSLGWDDPAVYELLQRG
DTVGVFQLESEGMRKTLAAVRPTNFGDIIALVSLYRPGPMDNIPMFGRRKNGQEEIEYPH
ILLKPILEETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKIKAEMDAQRARFVEG
CARSDIATGKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPAEFYAASMAFD
IHLTDKLTVFVDDMRRMGLACLAPDINRSQADFSVEAIEQEGDDPRLGFAVRYALGGLKG
VGEKAMEQLVAEREAGGPFKSLDDFADRIEPRLLNRRQLESLAAAGAFDGVYADRAGVHA
AAETILSVASSAAEARESGQGGLFGDVETPHADVRIPPHQTWSTADRMAQEKDAFGFYFS
AHPVDRYRHLAEARGAKSYGAICAEPVAEGGRANGVMAAMVEDVRWRETKRGARYAAATF
SDSSGQFQASCFDEDACRAIEDMAREGDCALLMVELDRLPGEETPRVTIRGIEPFRQLAN
SSRMELVVDVSDAAAINVLAQLLARARGGRSEVFLRAPVGDGKAARLFLGDDYLIGADQV
DSIATIPGLRIGSFERMEAKADGYRARNRRSGLRLVAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgccggtttcgtcccccttcgcgtcttttcatccttcaccatgctggaaggg
gcgatcgaccccaagaagatcgcgaaacaggccaaggcgttgggtttcccggcggcggcc
attaccgaccggaacggcctgtacggttccatggccttttccgacgcctgcaagggggag
ggggtgcaaccggtcattggcgcgatggtcggcgtggcccggcccgaccgcccggccaat
gcgccgccggtgcacgactggatcgccctctatgcccaggatgcggcaggttacgacaat
ctgtgcgcgctggtttcgatggcgcatctggaacgcccggtcgaggaagtgccgcatatc
agcctggctatgctggaggggcgaaccgatggcctgatcgccctgaccgccgggggagaa
ggcgcgctggcccgcctgttcgcggaagatcagcccgccgccgcgcttgcttatgcgaag
cggcttgaagcgcttttccccgaccggctttatatcgaaatctgccgtcgtctcgacccg
gtggagggtaaagcggagccggaactgctcgacctcgcctatgcccgcaacctgcctttg
gtggccaccaaccccacctgttttgccgagccgcatttccatgaggcgcatgacgtgatg
ctgtgcattgccgacagcgcctatgtcgagacgcctgaccgccggaccagttcgcccgac
gcctggatgaaaccggcggcggaaatgaaacggctgttcgaggatttgcccgaagcgctg
gccaatacgctggtcgtcgcgcaacgctgcgccgtggcagcgcccaagcgcaaacccatc
ctccccagcctggccggcgatatagagggcgaggcgaagatgctgcgcgagcaggcggcg
gaggggctggaagcgcggctggccaaggcgggaatcatcgatgaggaagcgcgcaagccc
tatttcgaccggttgaagttcgagacggacatcatcatccagatgggctttccgggctat
ttcctgatcgtcgccgactttatcaaatgggcgaaggatcaggatatcccggtgggtccg
ggccgcggttcgggcgcgggatcggtcgtcgcctgggcgctgaccatcaccgatctcgat
ccgctgcaattgggactgttgttcgagcgcttcctgaacccggaacgcgtctccatgccg
gacttcgacatcgatttctgcgaaacccggcgcggggaagtcatccgctacgtccagcag
aaatatggcgcggaccatgtggcgcagattatcaccttcggaaagctgaaggcgcgggca
gtgctcaaggacaccggccgcgtgttgcagatgagctatgggcaggtcgaccgtctggcc
aagctggtgcccaaccatccgaccgatccctggacgctggagcgttccctgaacggcgtg
gccgaattccgggcggaatatgacaatgacaatcaggtccggcgcctgatcgactatgcg
atgaagctggagggctttccgcgccacagttcgacccatgcggcgggcgtggtgatcggg
gacaggccgctgtcgcaactggtgccgctctatcgcgatcctcggtcggacatgccggtg
actcagttcgacatgaaatatgtcgagggcgcggggctggtgaagttcgacttccttggc
ctcaagacgctgtcggtcttgcagaaggcggtgcaattgctcgccgggcggggtgtggaa
atcgatctcaattcgctgggctgggacgatccggcggtgtacgaactgctccagcgcggc
gacacggtgggcgttttccagttggaatcggaaggcatgcgcaagacgctggccgccgtg
cgcccgaccaatttcggggacatcatcgcgctggtgtcgctttaccgccccggcccgatg
gacaatattccgatgttcggtcgtcgcaagaacggacaggaagagattgaatatccacat
atcctcctgaaaccgatcctcgaagaaacttacggcatcttcgtctatcaggaacaggtg
atgcaggccgcgcagatattggcgggctattcgctgggcgacgccgacctgctgcgccgc
gccatgggcaagaagatcaaggcggaaatggacgcccagcgtgcccgcttcgtggagggc
tgcgcgaggagcgacatcgcgacgggcaaggcgaatgaactgttcgatttgatcgataag
ttcgcgggctatggtttcaacaagtcgcacgcggcggcctatgccctgctcgcctatcag
accgcctggttgaaggcgcattatccggcggaattctatgccgcatccatggccttcgat
atccacctgaccgacaagctgacggtgttcgtggacgatatgcggcggatggggctggcc
tgcctcgcccccgacatcaaccgcagtcaagcggatttctctgtcgaggcgatcgagcag
gaaggcgacgatccgcgcctgggctttgccgtgcgctatgccttgggcggcctgaaaggc
gtgggcgaaaaggcgatggagcaactggtcgcggaacgcgaagcgggcggtccgttcaag
tcgctggacgattttgccgaccgcatcgagccgcgcctgctcaaccggcggcagttggaa
agccttgcggcggcgggcgcattcgatggcgtgtatgctgaccgcgcaggcgtgcatgcg
gcggcggaaacgatcctcagcgtggcctctagcgcggcggaggcgcgggaaagcgggcag
ggcggcctgttcggggatgtcgaaacgccgcatgctgatgtccgcatcccgccgcatcag
acctggtcgacggcggaccgcatggcgcaggagaaggatgcgttcggcttttatttctcc
gcccatccggtcgaccgttaccgccatctggccgaggcgcggggcgcgaaaagctatggc
gccatctgtgccgagccggtggccgagggtggccgggccaatggggtgatggccgccatg
gtggaggatgtgcgctggcgcgagacgaagcggggtgcgcgatatgccgccgccaccttc
tccgacagcagcgggcagtttcaggcaagttgcttcgatgaggatgcctgccgggcgata
gaggatatggcccgggagggcgattgcgccctgctgatggtggaactggatcgcctgccg
ggcgaggaaacgccgcgcgttacgatccgaggaatcgagcctttccggcaactggccaat
agctcccgcatggaattggtcgtggatgtcagcgatgcggcggccatcaatgtcctggcg
caattattggcgcgggcgaggggagggcgcagcgaggtgttcctgcgggcgccggtgggc
gacgggaaggcggcgcgcctgttcctgggcgacgattatctgatcggcgcggatcaggtg
gacagcattgccacgatccctggcctgcgcatcggctccttcgaacggatggaggccaag
gcggacggctatcgcgctcgtaaccggcggtcggggctgcggctggtggctggctga
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