Sphingobium chlorophenolicum: Sphch_0810
Help
Entry
Sphch_0810 CDS
T01522
Name
(GenBank) DNA photolyase FAD-binding protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_0810
Enzymes [BR:
sch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Sphch_0810
DNA repair and recombination proteins [BR:
sch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Sphch_0810
Prokaryotic type
Sphch_0810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
AEG48504
UniProt:
F6F0B9
LinkDB
All DBs
Position
1:complement(882004..883380)
Genome browser
AA seq
458 aa
AA seq
DB search
MSTPVLLWLRQDLRLADQAALAAAVREGPVIPVYVLDDQAPRQWKMGGASRWWLHHSLAN
LDASLREKGSRLILRQGDSVEQLVAIAEEVGAGRVHALHHYEPWWRNAEKAVAKRLDLCL
HDGGLLLPPGVVRTGGGSSYRIYTPFARAVMEQMPPATPVRAPSRIDAPSDWPKSDSLAD
WGLLPVKPDWAVAFSSDWTPGEAGARTNVAAFLDEAADYDVARNLPSQEGTSRLSPHLHF
GEVSPAYVWHRIVGTGDDATTFLKELIWRDYAHTQIWAMPTYGSENARPAFDAMPWRDLR
EAGEDFKAWQSGRTGYPIVDAGMRQLWATGWMHNRVRMIAASFLIKHLLIDWRHGARWFW
DTLVDASYANNSVNWQWVAGSGVDANIFSRIMAPLTQSEKFDAAGYIRTWVPELAHLDDE
HIHDPDAHGIRPPDYPAKRIGHREGRERALAAWGHGKP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccgttctgctatggcttcgtcaggatctgcgccttgccgatcaggctgcg
ctggccgctgccgtgcgggaggggccggtgatacccgtctatgtgctggacgatcaggca
ccccgtcagtggaagatgggcggggcttcccgctggtggctgcatcacagcctggcgaac
ctggacgcgagcctgcgggaaaagggttcccgcctgatcctgaggcaaggcgatagcgtc
gagcagctagtcgccatcgcggaggaagttggagcggggcgcgtccatgcgttgcaccat
tatgagccatggtggcgcaatgcggagaaggcggtcgccaagaggctggacctttgcctg
catgacggcggattgctgctgccgccgggggtggtgcggacgggcgggggaagcagttac
cggatatatacacccttcgcccgcgccgtgatggagcagatgccgcccgcgacgccggtg
cgcgcgccttcccgcatcgatgcgccttcggattggccgaaaagcgattcgctggccgat
tggggccttttgcctgtgaaaccggattgggcggtcgccttttccagcgactggaccccc
ggggaggccggggcgcggaccaatgtggcggcatttctggacgaagcggcggattatgac
gtggcgcggaacctgccgtctcaggaagggacgtcgcgtctttcgcctcatcttcatttc
ggggaggtttcgcccgcctatgtctggcaccggatcgtcggaacgggggatgacgcgacg
accttcctcaaggaactgatctggcgcgactatgcccatacgcaaatctgggcgatgccc
acttatggttcggaaaatgcccgcccggctttcgacgccatgccctggcgcgatcttcgg
gaggcgggggaagacttcaaggcatggcaaagcgggcggacgggctatccgatcgtggat
gcgggcatgcggcagctctgggcgaccggatggatgcacaatcgcgtccggatgatcgcg
gcgagtttcctgatcaagcatctgctgatcgactggcggcatggggcgcgctggttctgg
gatacgctggtcgacgccagctacgccaacaacagcgtcaactggcaatgggttgcgggc
agcggcgtcgatgccaatatcttttcccgcatcatggcgcccctgacccagtcggagaag
ttcgatgccgccggctatatcaggacgtgggtgcccgaattggcgcatctggacgatgaa
catatccatgaccccgacgcccatggaatccgcccgcccgattatccggccaagcgcatc
ggccaccgggaggggagggaaagggctctggccgcctggggccatggcaagccatga
DBGET
integrated database retrieval system
