Sphingobium chlorophenolicum: Sphch_1256
Help
Entry
Sphch_1256 CDS
T01522
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
sch
Sphingobium chlorophenolicum
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sch03021
]
Sphch_1256
03009 Ribosome biogenesis [BR:
sch03009
]
Sphch_1256
Transcription machinery [BR:
sch03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sphch_1256
Ribosome biogenesis [BR:
sch03009
]
Prokaryotic type
rRNA transcription factors
Sphch_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_2
KH_1
KH_NusA_C
KH_KhpA-B
RAD51D_N
CHASE2
Motif
Other DBs
NCBI-ProteinID:
AEG48945
UniProt:
F6EW66
LinkDB
All DBs
Position
1:complement(1358908..1360479)
Genome browser
AA seq
523 aa
AA seq
DB search
MANAISANKAELLAIANSVASEKMIDKAIVIEAMEDAIQRAARARYGAENDIRAKLDPET
GDLRLWRVVEVVEAVDDYFKQVDLRQAQKLKKDAVIGDFIVDPLPPIDLGRIDAQSAKQV
IFQKVRDAERERQHEEFKDRVGEIITGVVKSVEFGHVVVNLGRAEGVIRRDQQIPREVVR
VGDRIRSVILNVRRENRGPQIFLSRAHPEFMKKLFAQEVPEIYDGVIEIKAAARDPGSRA
KIGVISRDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQPAQVA
RVVIDEEEERIEVVVPDDQLSLAIGRRGQNVRLASQLTGKAIDIMTEADASEKRQKEFVA
RSELFQNELDVDETLSQLLVAEGFGELEEVAYVGVEELAAIEGFDEDLAAELQSRAQEAL
DRREAAAREERQALGVEDALADMPHLTEAMLVTLGKAGIKTLDDLADLATDELVAKKRVD
QRRRRENKEEDKGGILAEYGLSEEQGNEIIMAARAHWFEGEEA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgccatttccgccaacaaggccgagttgctcgcgatcgccaacagcgtcgcc
agcgaaaagatgatcgacaaggccatcgtcatcgaggcgatggaagacgcgatccagcgc
gccgcccgcgcccgctacggcgcggaaaacgacattcgcgcgaaactggacccggaaacc
ggcgatctgcgcttgtggcgcgtggtcgaagtggtcgaggccgtggacgattatttcaag
caggtcgacctgcgtcaggcgcagaagctgaagaaggatgccgtgatcggcgacttcatc
gtcgacccgctgccccccatcgacctgggccgcatcgacgcccagtcggccaagcaggtg
atcttccagaaggtccgcgacgccgagcgcgagcgccagcatgaggaattcaaggaccgc
gtgggcgagatcatcaccggcgtcgtcaagtcggtcgaattcggccatgtcgtcgtgaat
ctcggtcgcgccgagggcgtcatccgccgcgaccagcaaatcccccgcgaagtcgttcgc
gtcggcgaccgcatccgttcggtgatcctgaacgtgcgccgggaaaatcgcgggccgcag
attttcctcagccgcgcccatcccgaattcatgaagaagctgttcgcgcaggaggtgccc
gaaatctacgacggcgtgatcgagatcaaggccgccgcccgcgatccgggcagccgcgcc
aagatcggcgtcatcagccgcgattccagcatcgatccggtcggcgcctgcgtcggcatg
aagggcagccgcgtgcaggccgtcgtgcaggaaatgcagggcgagaagatcgacatcatt
ccctggagcgaggacaccgcgaccttcgtcgtcaacgcgctccagcccgcgcaggtcgcc
cgcgtcgtcatcgatgaagaggaagagcgcatcgaagtcgtcgtccccgacgatcagctc
agcctcgccataggccgtcgcggccagaatgtacgtctggcttcgcagctcaccggcaag
gccatcgacatcatgaccgaggccgacgcatccgaaaagcgccagaaggaattcgtcgcc
cgctccgaactgttccagaacgaactggatgtggacgaaaccctctcgcagcttctggtg
gccgagggcttcggcgaactggaagaagtcgcctatgtcggcgtcgaagaactggccgcg
atcgagggcttcgacgaagaccttgccgccgaactccagagccgcgcccaggaagcgctg
gaccgccgcgaagccgccgcccgtgaagagcgtcaggcgctgggcgtagaggacgcgctg
gccgacatgccgcacctcaccgaagccatgctggtgacgctgggcaaggcgggcatcaag
acgctggacgatctggccgatctcgccaccgacgaactggtcgccaagaagcgcgtcgac
cagcgccgtcgccgcgagaacaaggaagaggacaagggcggcatcctggccgaatatggc
ctcagcgaagagcagggcaatgagatcatcatggccgcccgcgcccactggttcgaaggc
gaggaagcgtaa
DBGET
integrated database retrieval system
