Sphingobium chlorophenolicum: Sphch_1492
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Entry
Sphch_1492 CDS
T01522
Name
(GenBank) RHS repeat-associated core domain protein
Organism
sch
Sphingobium chlorophenolicum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6443
DUF4595
DUF6531
Motif
Other DBs
NCBI-ProteinID:
AEG49180
UniProt:
F6EYH8
LinkDB
All DBs
Position
1:complement(1606413..1610615)
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AA seq
1400 aa
AA seq
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MDGHCRNNNELLLEKKPCNCDNGGHPNPMVGNPIILSSGAKVITASDFETSDGLFRIGRH
YRSFQVGRPIDGVALPQSLPRGLAGGWNFDFSYEIQLGTFSGSPSSPNAKVALLAPDGAG
YGFVLQSSGQWVSDPSVGTANAPTDLKLEYVGTLPSNLPDIKTSSSSWKLTDRDDNVWIL
QTRVGPNGGSYNRGWPTSKTARGGYAWTYAYNSDSSLASITDSFGRAANVSWYNFYTTSL
ASPPAGSLPYPLAISSISLPDGTSLRYSYDPAPATSAPSTSIIQRLIKVERLSVSAAVLD
STTYLYEDSRFPGHVTGILDNLNNRVATYAYDARGHANLTQGGEGSDRYAVEFGQNGTTL
TRRVTNALGKASTYNFSSFGTGPGDFRLSQIAGEASANSPASSSSLTYGTNTFIASQTDE
EGRLTTFVRDGLGRPTSTIEGSGTASQRTTTTSWDSTYNLPASIVRAGLTETRSYTATGQ
LGSLTLTDTTSQTVPYSTNGQTRTYSYGWDSNGRLLSVNGPLAADAQGHDDLTTFAYDAQ
GNLQTMTNPLGQVTSYASYDANGRPGTMTDPNGIVTAFTYDSLGRVLTVRVKHPTDSAQD
TVTTFTYDGAGRMTGLTLPSTETLLMDYDAAGRVIALRAANGERRDYTYDAMNNVASETV
KRSDVTISRRISRTFDELGRMLSQTTGPGRTARWGYDKVGNIVQTKTPNGNAATQAFDAL
DRLVSAVAPDSGATSQDYDSRDNLVSFTDAVSVTTQFVRNGFGDAIQEVSPDRGTSTYWY
DAAGALIKSNDGRGQVIDFTRDYMGRITQKVPQGRPSSEIVTYSWDAGGLTGSYDFGHIG
QIVDGSGTTQFKYDHRGNLLARQQTIGSGSGQVAYAYDFADRVTQITYPSGRIVHYGYDS
KGRVNLVETKASASVSSWTQVANGYAYEPFGAVKAMQLGNGLAVANDWGNDGRLASRRLY
RTSDGTSLSWLGYGYDLNDNISSITDQLSSAGPVVYGYDANDRLVQTSMSSSGTPATTSY
AYATGTNRLSSVTNAAGTRTISYDGRGNTASESRPGSISASTSYDGYGRLTGYSRTDVGA
LDFAYNGLDDRVAMTSGTGTRRFVYDPDGRVLGEYGASATDVKAEFIWALPQVANDNTPF
GGDDGVSGYAPLAVATPDGSGVIQLNWVHGNHMGVPLITTDASGVLATTPNDYLAPGFPG
QSKVLADLYYNRYRDFDPTTGRYIQADPIGLEGDSNSYLYVDANPLKYIDPLGLKGAHSG
GNNCFYDDNGELLFCDVPIEPIYWEQWLPVGKAFEFCGTLYRTWRFERRLEQVRRRLPGW
QETPNRKGVGSRFVNPANRGNRVRVDRGKPDHNLPSQRPDHVVEQRNGVTVDGNGTPISA
PKPASTPEAHVPLRDWLRNN
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
gtggatggccattgccggaacaacaatgaactgctcctggaaaagaagccgtgcaactgt
gacaatggggggcaccccaaccccatggtcggtaatccgataatattgtcatcaggcgcc
aaggtcatcactgcatccgactttgagaccagcgatggattgtttcggataggcaggcat
tatcgcagctttcaggtcggtcgccctattgacggcgtagctttgccccaatccctgccc
aggggcttggctggcggctggaatttcgatttcagctacgaaattcagctaggaactttt
tcgggatcgccttcgtcgcctaatgccaaggtggcgctcctcgcgcccgatggcgcgggc
tatggctttgttttgcaatcaagcggacagtgggtttcggacccgtcggttggtacggct
aatgcgcctacggacctaaagcttgaatatgttgggacgctgcccagcaatcttcccgac
attaagacatcatcgagcagctggaaactgacggatcgagacgacaatgtctggattcta
cagacgcgtgtcggtcctaacggcggcagctataacaggggttggccgacatccaaaacc
gcgcgaggcggctatgcttggacatacgcctataacagcgatagcagcctagcgtcgatc
accgacagtttcggccgtgcggcgaatgtctcctggtataatttttacacgacgtcgctg
gcgtcgccgcccgcgggatctctgccttatcccttggccatatcatcgatttcgctgccc
gacggcacctcgcttcgttacagctacgatccagcccctgcgaccagtgcgccttcgaca
tcgataattcagcgcctgatcaaggtcgaaaggttgagtgtcagcgcagcggttctcgat
tcgaccacttacttgtacgaggacagtcgctttccgggacatgtgaccggtattctcgac
aatctgaacaatcgcgtagccacctatgcttatgatgcacgagggcatgccaacttgact
cagggcggcgagggttctgatcgctacgctgttgaattcggccagaacgggaccactttg
acgcgcagggtaaccaatgctctgggcaaggcttccacatataatttttcaagcttcggt
acggggcctggtgattttcggctctctcagatcgctggtgaagcgagcgcaaacagcccg
gccagcagcagttcgctcacctatgggacgaatacgttcattgcgagccagaccgacgaa
gaaggccgcctgacgacattcgtccgggatgggctaggccgcccaaccagcacgatcgag
ggcagcgggaccgcaagccagcgaacgaccacgacaagctgggattctacctacaatctg
ccggccagcatcgtgcgagctgggctgacggaaacgcgcagctacaccgccaccggccag
ctcggttcactgacgctgactgacacgacaagtcagacagtgccctattccacaaatggt
cagacccggacctatagctatggctgggatagcaacggccgcctgctgtccgtaaacggt
ccgcttgccgctgacgctcaggggcatgatgatctgacgaccttcgcctacgatgcccag
ggcaatcttcagaccatgaccaatcctctgggtcaggtcaccagctatgccagctatgat
gccaatggtcgcccaggcacgatgaccgatcccaatggcatcgttaccgcgttcacctat
gacagtttgggccgcgttttgaccgttcgggtaaagcatccgacggacagcgcgcaggac
acggttacgaccttcacctatgacggtgcaggccggatgacaggcctgacgctgccgtcg
accgagacgctgctgatggactatgacgcggcgggtcgagtgatcgccctgcgtgcggcc
aatggcgagcgtcgggactatacatatgatgcgatgaataatgtggcgtccgagacggta
aagcgaagcgacgtcaccatatcgcgacgcatctcaaggacgttcgatgaactcggccga
atgctcagccagacgaccgggcctgggcgaactgcgcgttggggttatgacaaggtcggc
aatatcgtccagaccaagacccccaacggcaatgccgcgacccaggccttcgatgcgctg
gatcggctggtgtctgctgttgcgccagacagtggggcaacatcccaggattatgactcg
cgtgacaatctcgtcagcttcaccgatgctgtgtcagtcacgacccagttcgttcgcaat
ggctttggtgatgccatacaggaagtgtcacccgaccgcggcacgagcacctactggtat
gatgcggccggagcgctgatcaagtcgaatgacgggcgtggtcaggtcatcgactttacc
cgcgactatatgggccgaattacgcagaaggtgccgcaggggcggccctcgtccgaaatc
gtgacctatagctgggatgccggtggtttgacgggctcctatgattttggccatatcggc
cagattgtggatgggtcgggcacgacgcagttcaaatatgatcaccgaggcaatctgctg
gctcgccagcagacgatcgggtcgggcagcgggcaggtcgcatatgcctatgattttgca
gaccgggttacccagatcacctatccgtcggggcggatcgtgcattatggctatgacagc
aagggccgtgtgaaccttgtcgagaccaaggcttcggcctcggtgtcttcatggacgcag
gtggccaacggctatgcctatgaacctttcggcgcggtgaaggccatgcaactaggcaat
ggtctggcggtggcgaatgactggggcaatgatgggcggctagcctcacgcaggctatac
cgcacgagcgatgggaccagcctgtcctggctcggctatggctatgatctcaacgacaat
atcagctctatcaccgatcaactgagttcggcagggccggtggtctatggctatgacgcc
aatgaccgattggtgcagacgtcgatgtcctcatccgggactccggcaaccaccagctat
gcctatgcgacaggaaccaaccggctgtcgtcggtgacgaatgcggcggggacgcggaca
atcagctatgatgggcggggcaacacggcctcggaaagccgccccggtagcatcagcgcg
agcacgagctatgacggctatggacgtctgacgggatatagccggacggatgtgggcgcg
ctcgacttcgcctataacgggcttgatgaccgagtggcgatgacttccggtacgggcacg
cggcggttcgtctatgatccggacgggcgtgtgctgggggaatatggtgcctcggcgacg
gatgtgaaggcagagttcatctgggcgctgccccaggtggccaatgacaatacgcccttt
ggtggcgatgatggcgtaagtggctacgcgccgcttgccgtggcgacaccggacggctcg
ggcgtgatccagctcaactgggtgcatggcaatcatatgggtgtgccgctgatcacgacg
gatgcatctggtgtcctcgcgactacgcccaacgactatctggcacccggctttccgggg
cagagcaaggtcctcgccgacctctattataaccgttatcgggactttgatccaacaacc
gggcggtacattcaggccgatcccatcgggctggagggggatagtaattcttatctctat
gtagacgccaacccgcttaaatacatcgatccgttaggcctgaagggcgcccatagtggg
ggcaataattgtttttacgatgacaatggagagttgttgttttgcgatgtgccgattgaa
ccgatctattgggagcaatggctgccagttggaaaggcatttgagttttgtggcacattg
tacaggacatggcgctttgagcgacgacttgaacaggttcgtaggcggcttcccggatgg
caagaaacgccaaacagaaaaggtgtagggagtcgcttcgtaaatcccgccaatagagga
aatcgagtacgggttgacagaggtaagcccgaccacaacctgccttcacagcgtccagat
catgtggtggaacagcggaatggtgtaacagttgacgggaatggaactccaattagtgcg
cccaagccggcttcaactccggaagctcacgttcctttacgcgactggctaaggaataat
tga
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