Sphingobium chlorophenolicum: Sphch_1753
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Entry
Sphch_1753 CDS
T01522
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sphch_1753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_1753
DNA repair and recombination proteins [BR:
sch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sphch_1753
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sphch_1753
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
UB2H
AAA_16
DUF87
Microtub_bd
SWI2_SNF2
AAA_22
AAA_7
DUF2963
eIF3_p135
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AEG49439
UniProt:
F6F0K1
LinkDB
All DBs
Position
1:1869037..1871220
Genome browser
AA seq
727 aa
AA seq
DB search
MSIQIRTTLEEPKTGEAFVPHRPARPEKSEGGRAFKLVSDYEPSGDQPTAIAELVETALT
GEKDQVLLGVTGSGKTFTMAKVIEALQRPALVLAPNKILAAQLYGEFKSFFPENAVEYFV
SYYDYYQPEAYVARSDTYIEKESSVNEAIDRMRHSATRALLERDDVLIVASVSCLYGIGS
VETYSAMTFSMKKGQVEDQREIIRKLVALQYKRNDAAFARGNFRVKGDNLEIFPSHYEDT
AWRVSFFGNEIEEIVEFDPLTGKKIASLDYVKVFPNSHHVTPGPTLKQAMEAIRFELAER
LKELTAEGKLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYLP
ENALLFVDESHQTVPQIGAMARGDHRRKITLAEYGFRLPSCIDNRPLRFNEWDAMRPQTV
SVSATPGPWEMEQTGGVFSEQVIRPTGLIDPPVEIKPVEDQVDDLINECRKVAAQGYRTL
VTTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLERIELIRDLRLGVYDVLIGINLLREGL
DIPECGLVAILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRVTGSMERALNETSR
RREKQMEYNAAHGITPQTVKKNIGDIIAHVASKDQVTVETGLEDRPHLVGHNLRAYIEDL
EKKMRAAAADLEFEEAGRIRDEIRKLEAEELGLPAGQQVAAPRGRATEGKPGTRKLRYGK
VQKKFGR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccagattcgcaccaccctagaggaacctaaaaccggcgaagctttcgtcccc
caccgccctgcgcgcccggaaaagagcgagggcgggcgggcgttcaagctggtttccgac
tatgaaccgtcgggcgaccagccgaccgccatcgcagaactggtggagaccgcgctgacg
ggcgagaaggatcaggtgctgctgggcgtcaccggatcgggcaagaccttcaccatggcg
aaggtgatcgaggcgttgcagcggcctgcgctggtgctggcgccgaacaagatattggcg
gcgcagctttatggggagttcaagagcttcttccccgaaaatgcggtcgaatatttcgtc
agctattacgactattaccagcccgaagcctatgtggcgcggtcggacacctatatcgag
aaggagtccagcgtgaacgaggcgatcgaccggatgcggcattcggccactcgcgccctg
ctggagcgggacgatgtgctgatcgtggcgtccgtgtcctgcctgtacggcatcggatcg
gtcgagacctattcggccatgaccttctccatgaagaaggggcaggtggaggaccagcgg
gagattatccgcaagctggtggcgttgcagtataagcgcaatgatgcggccttcgcgcgc
gggaatttccgggtgaagggggataatctggagattttcccctcccactatgaggatacg
gcgtggcgggtcagcttcttcggcaatgagattgaggagattgtcgagttcgacccgctg
acggggaagaagatcgcgtcgttggactatgtgaaggtctttcccaacagccaccatgtt
acgccggggccgacgctgaagcaggcgatggaggcgatccggttcgaactggcggagcgg
ctgaaggaactgaccgccgagggcaagctgctggaggcgcagcggctggagcagcggacc
aatttcgacctggagatgatcgcggcgaccggctcctgcgcggggatcgaaaattattcg
cgcttcctgaccgggcgtctgccgggcgagccgccgccgactttgttcgagtatctgccg
gaaaacgcgctgctgttcgtggacgagagccaccagaccgtgccgcagatcggcgcgatg
gcgcggggcgaccatcggcggaagatcacgctcgccgaatatggattccgcctgccgagc
tgcatcgacaaccggccgttgcgcttcaacgaatgggacgcgatgcggccacagacggtt
tccgtgtccgccacccccggcccgtgggaaatggagcagacgggcggcgtcttttccgag
caggtgatccggccgacggggctgatcgatccgccggtggagatcaagccggtggaggat
caggtggacgacctgatcaacgaatgccgcaaggtggcggcgcagggttatcgcacgctc
gtcaccacgctgaccaagcggatggcggaggatctgaccgagttcatgcatgaggcgggg
atcaaggtccgctacatgcatagcgacgtcgagacattggagcgcatcgagctgatccgc
gatttgcggctaggcgtctatgacgtgctgatcggcatcaacctgctgcgcgaggggctg
gatatccccgaatgcgggctggtggcgatattggatgcggacaaggaaggattcctgcgg
tccgaaacctcgctgatccagaccatcgggcgggcggcgcgcaatgtcgacgggcgggtg
atcctctatgccgaccgggtgacgggcagcatggagcgggcgctcaacgaaacgtcgcgg
cggcgcgagaagcagatggaatataatgccgcgcacggcatcacgccgcagacggtgaag
aagaatatcggcgacatcatcgcccatgtggcgtcgaaggatcaggtgacggtcgagacg
gggctggaggatcggccgcacctcgtcgggcataatctacgagcctatatcgaggatctg
gagaagaagatgcgcgccgcggcggcggacctggagttcgaggaagccgggcggattcgg
gacgaaatccggaagctggaggcggaggagcttgggctgcctgccgggcagcaggtggcg
gcgccgagagggcgggcgaccgaggggaagccggggacgcggaaattgcgctatgggaag
gtgcagaagaagtttgggcggtag
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