Sphingobium chlorophenolicum: Sphch_2005
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Entry
Sphch_2005 CDS
T01522
Name
(GenBank) Phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch00730
Thiamine metabolism
sch01100
Metabolic pathways
sch01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
Sphch_2005
Enzymes [BR:
sch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
Sphch_2005
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AEG49682
UniProt:
F6EVC1
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Position
1:complement(2135701..2137569)
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AA seq
622 aa
AA seq
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MADVPARTEMRVTTGPIRGSRKIHVGPLKVAMREIDLESGSGEQPVRVYDTSGPYTDPNA
RIDIMAGLPALRRDWIVGRGDVEEYDARAIQPEDNGLKGPDRSGGVQPFPNTIKRPLRAK
AGANVSQMHYARRGIITPEMEYVAERENLGRARLAEYVRDGHDWGASIPDYVTPEFVREE
VARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVASEVDKLVWSIRWGADT
VMDLSTGRNIHDTREWIMRNSPVPIGTVPIYQALEKVGGIAEELTWEIFRDTLIEQAEQG
VDYFTIHAGVRLPYIPMTAKRVTGIVSRGGSIMAKWCLAHHKESFLYEHFDEITQIMKAY
DIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWEQDVQVMIEGPGHVPMHKIKQN
MDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSRARFEFRWRDQFNLSLDPDTAEKYH
DQTLPAEGAKSAHFCSMCGPKFCSMKITQEVRDFAAKQNQPADSFIAATTEEEAEKGMAE
MSALYHQTGRELYMGAGDREHD
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtccccgcccgcaccgaaatgcgcgtcaccaccgggcctattcgcggctcg
cgcaaaatccatgtcggtcccttgaaggtcgccatgcgagagatcgacctggaatccggc
agcggcgagcagcccgttcgcgtctatgacacgtctggcccctataccgatcccaacgcc
cgcatcgacatcatggccgggcttcccgcgctgcgccgggactggatcgtcggtcgcggc
gatgtcgaggaatatgacgcccgcgccatccagccggaggataacggcctgaaaggcccc
gaccgcagcggcggcgtccagccctttcccaacaccatcaagcggcccctgcgcgccaag
gccggggccaatgtcagccagatgcactatgcccgccgcggcatcatcacgccggagatg
gaatatgtggccgaacgcgagaatctcggccgcgcccgcctggccgaatatgtgcgcgac
ggccatgactggggcgcgtccattcccgactatgtgacgcccgaattcgtccgcgaggaa
gtggcgcgcggccgggccatcatcccgtccaacatcaaccacccggaatcggagccgatg
gccatcggccgcaacttcctggtcaagatcaacgcgaatatcggcaacagcgccgtcgcc
tccgacgtggcgagcgaagtcgacaagctggtctggtcgatccgctggggcgcggacacg
gtgatggacctttcgacaggccgcaatatccacgacacccgcgaatggatcatgcgcaac
tcgccggtcccgatcggcaccgtgcccatctatcaggcgctggagaaggtcggcggcatt
gccgaggaactgacctgggaaatcttccgcgacacgttgatcgaacaggccgagcagggc
gtcgactatttcaccatccatgcgggcgtgcgcctgccctatatcccgatgacggcgaag
cgggtcaccggcatcgtcagccggggtgggtcgatcatggcgaaatggtgcctcgcccat
cacaaggaaagcttcctctacgagcatttcgacgagatcacgcagatcatgaaggcctat
gacatcgcctattcgctgggcgacggcctgcgtcccggctccatcgccgacgccaatgac
gaggcgcagttcgccgaactctatacgctgggcgaactgaccaagcgcgcctgggaacag
gatgtgcaggtgatgatcgaagggccgggccatgtgcccatgcacaagatcaagcagaat
atggacaagcagcttgaggcctgcggcgaagcgcctttctacacgctcgggccgctcacc
accgacatcgcgccgggttatgaccatatcacgtccggcatcggcgcggcgatgatcggc
tggtacggcacggcgatgctctgctacgtcacgcccaaggagcatctgggcctgcccgac
cgcgacgacgtgaaggtgggcgtggtgacctacaagctcgccgcacacgccgctgacctt
gccaaggggcatcccgccgccaaggtccgcgacgatgcgctgagccgtgcgcggttcgaa
ttccgctggcgcgaccagttcaacctgtcgctcgaccccgacacggcggagaaatatcac
gaccagacgctcccggcggagggtgccaagagcgcgcatttctgctccatgtgcgggccg
aaattctgctcgatgaagatcacgcaggaagtgcgcgactttgcggcgaagcaaaaccag
cctgcggatagcttcatcgcggccacgactgaagaggaagcggaaaagggcatggccgaa
atgagcgctctctatcatcaaaccggtcgtgaactttacatgggcgctggcgaccgcgaa
catgattga
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