Sphingobium chlorophenolicum: Sphch_2078
Help
Entry
Sphch_2078 CDS
T01522
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
sch
Sphingobium chlorophenolicum
Pathway
sch03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sphch_2078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sch03400
]
Sphch_2078
Enzymes [BR:
sch01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Sphch_2078
DNA repair and recombination proteins [BR:
sch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sphch_2078
Prokaryotic type
Sphch_2078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AEG49754
UniProt:
F6EVV2
LinkDB
All DBs
Position
1:2204747..2205817
Genome browser
AA seq
356 aa
AA seq
DB search
MRVEGNIPKIASDLLAHYDVHARRLPWRAPPGANAADPYRVWLSEVMLQQTTVAAVGPYF
AKFTQRWPDVTALAAEEDAEVMAAWAGLGYYARARNLLACARAVAGDHGGVFPDTEDGLR
ALPGVGAYTAAAVAAIAFGRRAVVVDANVERVVARLFAIATPLPAARPEIRAATDAITPD
ARAGDFAQAMMDLGATICTPRNPACGICPLRQDCAAVLTADPAAFPVKAAKKARPHRLGH
GWWIERPDGHVWLVRRPGKGMLGGMRALPTSEWNGAPDATPPLPAPWRRLAEPVRHVFTH
FSLALTVHHAHVGPDVTPPGEGEWWPVAEIGKAGLPTLFARAAEMAMKERNDDARL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgagggcaacatcccaaaaatagcatccgatctgctcgcccattatgacgtc
catgcgcgcaggctgccctggcgcgccccgccgggcgcgaacgccgccgatccctatcgc
gtctggctgtcggaggtgatgctccagcagacgacggtcgcggcggtcggcccctatttc
gcgaaattcacccagcgctggcccgacgtaaccgcgctggcggcggaggaggatgcggag
gtcatggccgcctgggcaggccttggctattatgcccgcgcccgcaacctgctggcctgc
gcgcgcgccgtggcgggcgaccatggcggcgtctttcccgatacggaggatgggctgcgc
gccctgccgggcgtcggggcctatacggcggcggcggtggcggccatcgccttcggacgg
cgcgccgtggtggtcgacgccaatgtcgagcgcgtcgtcgcccgccttttcgccatcgcc
acgcccctgcccgcagcccgtccggaaattcgggcggcgaccgacgcgatcacgccggat
gcccgcgccggggatttcgcgcaggcgatgatggatctgggcgcgaccatctgcacgccg
cgcaaccccgcctgcggcatctgccccctgcggcaggattgcgcggctgtcctgaccgcc
gatccggccgccttcccggtcaaggcggcgaaaaaggccaggccgcaccggctgggccat
ggctggtggatagagcggccggacggccatgtctggctggtgcgtcgccccggcaagggc
atgctgggcggcatgcgggcgctgcccacatcggaatggaacggcgcgcccgacgctacc
ccgccgctgcccgcgccctggcggcggctggcggagccggtgcgccatgtttttacgcat
ttctccctcgcattgacggtgcatcatgcccatgtggggccggacgtgacgccgcccggg
gagggcgagtggtggccggtggccgaaatcgggaaggcgggtctgccgaccctgttcgcc
cgcgccgccgaaatggcgatgaaggagagaaatgacgatgcacggctctga
DBGET
integrated database retrieval system
